Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1660 ATGGGAGAAGATGCGAATTTGGGCGATGATGCGGATTGGGGGAAGATGGAGTGGCAGTGGACTTGCATGTGTGGCGGTCGACGTGACTTGGAGGCTGAAGAAGATGATGTGGTGGTGGGGTCTTTTCCCAAGAAAGATAGATGCTTTTCGAACGTGAAAAATAATCTGAAGTTGCGTAAGGACGTGCAAGAACATAGTGATAGCATGGTAATAGGAATTAAGTCACTGCTGCTTCACATCAATCGTTTCTATTCCAACATGTTGTGTTGCTGTAAACTGGAATCCCTTGCTCTCATTCTTGTCATCTCCGCTTCACACCACTTCATTCTCCTTCACTCTCAAGGGCCTAGCCCATCACCGGCGTACGAGCCACCTGACTTGCATCCGGACTACTCGCCACCTCCCCCGCCTCCGGATTCGCCACCTCCCTCGTCAATGGAGTCGTCACCTGCCCTGCCTCCGCAGTCACTACCGGCCCAGCCACCTCCCTTGTCACCGGAGTCGCCACCTCCCTCATCACCGAAGTCGTCACCTGCCCTGCCTCCGGAGTCACCACCGGCCCAGCCTCCGCCGCCAATAATTGATGCGCGCAATAGGACCACACCAACTGGACTAATTGCAGGGGCTGTGATTGGTTCGGTGCTGATAGTAGCGGGGCTTTTGACAGCTGAACAAGAGGTTGCACTTTCATTATATGCACCGCCATCTCCTTCCATTGTCTTGAGACTAGGGCCAAGATCATTTACATATGAAGAATTAGATTCGGCAACAAATGGATTCTCAGACTCAAATTTTCTGGGCGAAGGTGGTTATGGCGTTGTCCATAAAGGAGTCGTCCCCTATGAAGAAACCTGTGTTGCCATCAAGCAGCTAAAATCTGGAATCCAACAGGCTCAGAGAGAGTTCCTGACTGAAATCCAGGTTATACATCATGTCCATCACAAACATCTTGTTTCCCTCATTGGATACTGCATCGATGAAGCTCACGGCAAGATGATGCTTGTTTATGAGTTTGTACCAAATAAAACCCTAGGCTTCCACCTCCATGAAAGAGGAACAGAAACTATAAACTGGAAAACAAGGATGAAGATTGCTATTGGCTCTGCAAAAGGATTGGCATATCTGCATGAAGAATGTTGCAGATTTTGGACTGGCCAGATTTTCATTGGAGACCCAGGTCATTACTCGAATAATGGGAAGTTTTGGTTGATTACTGGACGAAAACCAGTTGGTGATACTGAAGCTTTTCCAAATGGCAGTATGGTTGAGTGGGTCGGTATTGCCGATGAAAGGTTGGAGAATGACTACGAGGTTGAAGAGATGTTTCGAATGGTTTCTTGTGCTGCTAATTGCATCCGCCATTCAGCCCCCAATCGTCCTCGAATGAGCCAGGTGATTCAAGCTTTAGAAGGAGTGATTTGTCTGGATAATGATCTGACGACGGACGAGAACCCGGCGAGGCATCATCTAAGCAAAGGCCTGAGCAAGTTGAGGAAGATCGCATTCAGATCATATAGCACCACACACTCTGATCAACTTTGCTACTACTCTACCACTTCCACCTCCACCTCCACTTCAAGTACTGCCTCCAAAATATTCATATAG 1605 0.4822 MGEDANLGDDADWGKMEWQWTCMCGGRRDLEAEEDDVVVGSFPKKDRCFSNVKNNLKLRKDVQEHSDSMVIGIKSLLLHINRFYSNMLCCCKLESLALILVISASHHFILLHSQGPSPSPAYEPPDLHPDYSPPPPPPDSPPPSSMESSPALPPQSLPAQPPPLSPESPPPSSPKSSPALPPESPPAQPPPPIIDARNRTTPTGLIAGAVIGSVLIVAGLLTAEQEVALSLYAPPSPSIVLRLGPRSFTYEELDSATNGFSDSNFLGEGGYGVVHKGVVPYEETCVAIKQLKSGIQQAQREFLTEIQVIHHVHHKHLVSLIGYCIDEAHGKMMLVYEFVPNKTLGFHLHERGTETINWKTRMKIAIGSAKGLAYLHEECCRFWTGQIFIGDPGHYSNNGKFWLITGRKPVGDTEAFPNGSMVEWVGIADERLENDYEVEEMFRMVSCAANCIRHSAPNRPRMSQVIQALEGVICLDNDLTTDENPARHHLSKGLSKLRKIAFRSYSTTHSDQLCYYSTTSTSTSTSSTASKIFI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1660 534 MobiDBLite consensus disorder prediction 118 196 - -
Alju05g1660 534 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 239 338 - -
Alju05g1660 534 SUPERFAMILY Protein kinase-like (PK-like) 236 477 IPR011009 -
Alju05g1660 534 Pfam Protein tyrosine and serine/threonine kinase 265 380 IPR001245 GO:0004672|GO:0006468
Alju05g1660 534 ProSitePatterns Protein kinases ATP-binding region signature. 266 289 IPR017441 GO:0005524
Alju05g1660 534 MobiDBLite consensus disorder prediction 116 199 - -
Alju05g1660 534 Gene3D Phosphorylase Kinase; domain 1 245 338 - -
Alju05g1660 534 Gene3D Transferase(Phosphotransferase) domain 1 340 394 - -
Alju05g1660 534 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 403 484 IPR047117 -
Alju05g1660 534 Gene3D Transferase(Phosphotransferase) domain 1 401 487 - -
Alju05g1660 534 ProSiteProfiles Protein kinase domain profile. 260 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1660 Alju-ChrAlju05 47764041 47774198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1660 238 533 Trihelix Transcription Factor Family AT1G70460 36.413 1.24e-59 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju05g1660 PK_Tyr_Ser-Thr 2.8e-20 CL0016