Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1652 ATGTATTCTTGTAAATTGGGATCCCTTGCTCTCCTTCTTGCACTCTCTGCTTCGCATTACTTCATTCTCCTTCACTGTGAAGAGCCTGACACTGAGCCGGAGTCGGATGATCATGACCTGCCTACGACTAAGTCGGCACCTGCGCAGGCTCCGATCGGACTAATTGCAGGGGCTGTGATTGGTTCGGTAGTGCTCATAGTGGGTTTATTTGCATGTTTCTTTATATGGAGAAAGAGAAGGACAAGACAATCTGCGCAACCACCCCATGCCAAAGAGGAGGTTGAACCGTCATCTGCTTCCGTTGGCTTGATACTAGGACCAACAAGATTTACATATGAAGAATTAGAAACGGCAACAAATGGATTCTCGGACTCAAATTTTCTAGGCGAAGGTGGTTATGGCGTTGTCCATAAAGGAGTTCACCCTTATGATAAACAAACTTATGTTGCCATTAAGCAGCTAAAATATGGAATCCAACAGGCTCACAGAGAGTTCCTTAATGAAATCGCCATCATTAATCGTGTCCATCACAAATATCTTGTTTCCCTTGTTGGATATTGTATCGATGAAGCTCGCAGCAAGATGATGCTTGTTTATGAGTTAGTATCAAATAATACCCTAGCCTTCCACCTCCATGGCACAGAAACCATAGACTGGAAAACAAGGATGAAGATTGCTATTGGCTCTGCAAAGGGATTGGCATATCTGCATGAAGAATGTCATCCGAAAATCATACACCGTGACATCAAGGCATCAAACATTCTTCTTGATGATAATTTTGAGCCAAAGCTGATTACTGGACGAAAACCTGTTGGCGATGAGACTTTTCCAAATGGCAGTATGGTTGAGTGGGTCCGTACTGCAAGACACTTGTTCTCGGAAGCTTTGGATAACGGACACTATGAAGGTATTGCAGATGAAAAGTTGGAGAATGATTACGACGTTGAAGAGATGTTTCGAATGATTTCTTGTGCTGCAAATTGCGTCCGCCATTCAGCCACCAATCGTCCTCGAATGATCCAGGTGGTGAAAGCTTTAGAAGGAGAGATTTGGCTAGAGAATGATATGACAGTGGAGAGCCCGGCGTGGCGTCAACTCAGCAAAGACATGAACAAGATGAGGAAGGTGGCAATGGGACCATATAGCACCACTCAGTCTGATCAACTTCACTCCACCACCACCACCACCTCCACTTCTAGTTCTGGCTCCAAAATATTCAGATAG 1224 0.4444 MYSCKLGSLALLLALSASHYFILLHCEEPDTEPESDDHDLPTTKSAPAQAPIGLIAGAVIGSVVLIVGLFACFFIWRKRRTRQSAQPPHAKEEVEPSSASVGLILGPTRFTYEELETATNGFSDSNFLGEGGYGVVHKGVHPYDKQTYVAIKQLKYGIQQAHREFLNEIAIINRVHHKYLVSLVGYCIDEARSKMMLVYELVSNNTLAFHLHGTETIDWKTRMKIAIGSAKGLAYLHEECHPKIIHRDIKASNILLDDNFEPKLITGRKPVGDETFPNGSMVEWVRTARHLFSEALDNGHYEGIADEKLENDYDVEEMFRMISCAANCVRHSATNRPRMIQVVKALEGEIWLENDMTVESPAWRQLSKDMNKMRKVAMGPYSTTQSDQLHSTTTTTSTSSSGSKIFR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1652 407 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 264 376 IPR047117 -
Alju05g1652 407 MobiDBLite consensus disorder prediction 380 407 - -
Alju05g1652 407 Gene3D Transferase(Phosphotransferase) domain 1 265 360 - -
Alju05g1652 407 Gene3D Transferase(Phosphotransferase) domain 1 202 264 - -
Alju05g1652 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Alju05g1652 407 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 101 201 - -
Alju05g1652 407 ProSitePatterns Protein kinases ATP-binding region signature. 128 152 IPR017441 GO:0005524
Alju05g1652 407 Pfam Protein kinase domain 124 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1652 407 ProSiteProfiles Protein kinase domain profile. 122 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1652 407 Gene3D Phosphorylase Kinase; domain 1 108 201 - -
Alju05g1652 407 CDD TM_EGFR-like 50 83 - -
Alju05g1652 407 SUPERFAMILY Protein kinase-like (PK-like) 101 346 IPR011009 -
Alju05g1652 407 SMART serkin_6 122 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1652 Alju-ChrAlju05 47668836 47675262 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1652 96 403 Trihelix Transcription Factor Family AT1G70460 43.935 7.58e-79 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju05g1652 Pkinase 6.5e-25 CL0016