Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1649 ATGAAAGGCAATGCGTCTAAGTTTGTCCCCAATAAAACCTTAGAGTTCCATCTCCGAGGAAAAGGCACAGAAACTCTAGGTTGGTCAACAAGGATGAAGATTGCTAATGGCTCTGCAAAAGGATTGGCATATCTGCATGAAGACTGTGAACCCAAAATCATACATCGCGACATCAAGGCAGCTAACATTCTTCTTGATAACAATTTTGAGCCCAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACGGAAACCCATGTCTCTACAGCCAAAATAAAGGGAACCTTTGGATACTTAGCTCCAGAATATGCAAATAGCGGGAAACTCTCAGAGAAGGCAGATGTGTTCTCCTTTGGTGTTGTGCTCTTGGAATTGATTACTGGACGAAAACCTGTTCTTCAAACTGGCTCTTTCGCAGTTGATAGTCTAGTTGAGTGGGCAAGGCCTTTACTATCCGCAGCTTTGGAAAATAGAAATTTTGAGGTTCTAGCTGATCCAAGGTTGCAAAACAATTACAACTCCGAAGAGATGTTTCGAATGGCTTGTTGTGCTGCAAATTGTGTTCGCCATTCACCCGACCATCGTCCTCGAATGAGCCAGGTAGTGGATGCTTTAACAGGAAAGATTAGTCTGGATAATTGGAAGGAGGAGAGCACACAAGTGGACAACCAAGACCTGAACAAGTTTTGGAAGAAGTCACGAGGCGAATACAATGAGCCTACCAGTTCAATCCGTGAAAATACAACTGATGAAGCCTCTTCATACTCAGCTTCTGTTTAA 786 0.43 MKGNASKFVPNKTLEFHLRGKGTETLGWSTRMKIANGSAKGLAYLHEDCEPKIIHRDIKAANILLDNNFEPKIADFGLAKLSSDTETHVSTAKIKGTFGYLAPEYANSGKLSEKADVFSFGVVLLELITGRKPVLQTGSFAVDSLVEWARPLLSAALENRNFEVLADPRLQNNYNSEEMFRMACCAANCVRHSPDHRPRMSQVVDALTGKISLDNWKEESTQVDNQDLNKFWKKSRGEYNEPTSSIRENTTDEASSYSASV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1649 261 SMART serkin_6 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1649 261 Pfam Protein tyrosine and serine/threonine kinase 8 207 IPR001245 GO:0004672|GO:0006468
Alju05g1649 261 MobiDBLite consensus disorder prediction 242 261 - -
Alju05g1649 261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 53 65 IPR008271 GO:0004672|GO:0006468
Alju05g1649 261 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 7 234 IPR047117 -
Alju05g1649 261 Gene3D Transferase(Phosphotransferase) domain 1 9 235 - -
Alju05g1649 261 MobiDBLite consensus disorder prediction 238 261 - -
Alju05g1649 261 SUPERFAMILY Protein kinase-like (PK-like) 8 207 IPR011009 -
Alju05g1649 261 FunFam proline-rich receptor-like protein kinase PERK8 9 222 - -
Alju05g1649 261 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1649 Alju-ChrAlju05 47574337 47579161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1649 7 237 Trihelix Transcription Factor Family AT1G70460 60.417 8.77e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju05g1649 PK_Tyr_Ser-Thr 1.2e-29 CL0016