Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1648 ATGAACTTCTACGGGATAGAATCTTCCGTACAGCGTTGTTTCCAATCTCATTTCTTCAATTTTGAATTTTCACGGTGTCTCTCACTGACATGGTCCACCACAAGTCCACCACATTTTACTCATCGCTTCACATGTGATGATACAATCTTCAATCTTGTAATTTGTGATATTTCTACCTTTCTCAATTCTCATGATCTCGCTTTCTCACTTTTTCTTTTTCCTCCTTCGTTCACACCTGTGTCTGAGCCCCTAAGCAGAAACCCTTCTTCTCCGGCGATGGCTTCGCCGTCTCCGGAAACATTTCCGCCTGTCAACTCCACGGCTCCTCCTCCTCCTGACACCGCCACCAATGGAACCTCTCCCCCAGTTCAGAGTAATTCCATGCCACCTACCGCCACTCCGGCGCCGCCTCCTCCTCCGGTCGTGTTTCCGACACCGGTGTCGGAATCAAACGGAATGTCCAAGGCTACATTAACGGGACTAGTTGTTGGGACTGTATTTGGCTCGCTGCTTATGCTCGTTTTGGTGGGCATTTGCGCTTTTTTCTATAAAAGGAGTAAGCGGAGGAGGATGAGAAAATACGGTTTGGACGATTACTCTGCTGCTCCTCCATCCCAACCCAAAGCTGATCAATTTGGTGGTCTGCCCCAGCAATGGCAGAATAACATGCCTCCTCCAACCGATGGTGGCAAGCCAGGTCCACCCGTAGGGGTTCTGATGAATCAGCAAGCATCATCTCATAATGTCGCATCTTCTCCCATGTATTCTACAAGTACCCCAAGTTTGGAATCTGAGAGACCGTACCATACATCATCTTCTGCCATTATTACCTTGGGACTGTCACAAATCTCGTTTACATATGAAGAACTTGCATTTGCAACAAATGGATTCTCAAACTCAAATCTTCTTGGTCAAGGGGGGTTTGGCTATGTCCATAAAGGAGTCCTCCCAAATGGAAAAACTGTTGCAATTAAGCAGCTGAAATCTGGGAGCAGACAGGGGGAGCGCGAATTCCAGGCTGAAGTGGAGGTGATTAGCCGTGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCATTGCTGGAACCCAGAGGATGCTTGTATATGAGTTTGTTCCAAACAATACACTAGAATTCCATTTGCATGGAAAAGATAGAACGGCAATGGACTGGGCAACAAGGGTAAAAATTGCTATTGGATCTGCAAAGGGATTGGCATATCTGCATGAGGACTGTCACCCAAGAATCATACATCGAGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGTTGCGGATTTTGGACTTGCCAAAATTTCATCAGATGCTGATACCCATGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTTGCTCCAGAATATGCTGCTAGTGGGAAACTCACTGAGAAGTCAGATGTCTTCTCTTTTGGTGTTGTGCTTTTGGAGTTGATTACTGGACGAAGACCTGTTGATAAAACCGAGTCTTTTACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTTTCTCAAGCCATGGAAAATAGAAACTTTGATGCTCTTGCTGATCCAAGGTTGCAGGAGTGTTACGACTCCGATGAGATGCTTCGAATGATTGCCTGTGCTGCAAATTGTGTGCGCCATTCAGCCAGGCAACGGCCTCGAATGAGCCAGGTGGTTCGGGCTCTAGAAGGCAATATTTCTTTGGATGATCTGAATGAGGGGAACACACCTGGGCATAGCAGAGCATTTAGTTCCTTTGAAAGTTCAGGTTATGATACTGGTCAATACAACGAGGACCTAAAGAAGTTCAGGAAGTTGGCATTAGAGCAAGAAACTAGTGAATACAGTGGACCTAGTAGCGATTATGGTCAACACCAATCTGCATCAAGCAGTTCAGGCATGCAAAATGCACCAGAGAAATGA 1947 0.4592 MNFYGIESSVQRCFQSHFFNFEFSRCLSLTWSTTSPPHFTHRFTCDDTIFNLVICDISTFLNSHDLAFSLFLFPPSFTPVSEPLSRNPSSPAMASPSPETFPPVNSTAPPPPDTATNGTSPPVQSNSMPPTATPAPPPPPVVFPTPVSESNGMSKATLTGLVVGTVFGSLLMLVLVGICAFFYKRSKRRRMRKYGLDDYSAAPPSQPKADQFGGLPQQWQNNMPPPTDGGKPGPPVGVLMNQQASSHNVASSPMYSTSTPSLESERPYHTSSSAIITLGLSQISFTYEELAFATNGFSNSNLLGQGGFGYVHKGVLPNGKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCIAGTQRMLVYEFVPNNTLEFHLHGKDRTAMDWATRVKIAIGSAKGLAYLHEDCHPRIIHRDIKASNILLDDNFEAKVADFGLAKISSDADTHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDKTESFTDDSMVEWARPLLSQAMENRNFDALADPRLQECYDSDEMLRMIACAANCVRHSARQRPRMSQVVRALEGNISLDDLNEGNTPGHSRAFSSFESSGYDTGQYNEDLKKFRKLALEQETSEYSGPSSDYGQHQSASSSSGMQNAPEK 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1648 648 MobiDBLite consensus disorder prediction 577 596 - -
Alju05g1648 648 MobiDBLite consensus disorder prediction 620 648 - -
Alju05g1648 648 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
Alju05g1648 648 ProSiteProfiles Protein kinase domain profile. 297 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1648 648 MobiDBLite consensus disorder prediction 617 648 - -
Alju05g1648 648 FunFam proline-rich receptor-like protein kinase PERK1 275 372 - -
Alju05g1648 648 Pfam Protein tyrosine and serine/threonine kinase 300 570 IPR001245 GO:0004672|GO:0006468
Alju05g1648 648 MobiDBLite consensus disorder prediction 95 117 - -
Alju05g1648 648 SMART serkin_6 297 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1648 648 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 170 619 IPR047117 -
Alju05g1648 648 MobiDBLite consensus disorder prediction 84 150 - -
Alju05g1648 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Alju05g1648 648 MobiDBLite consensus disorder prediction 198 240 - -
Alju05g1648 648 FunFam Proline-rich receptor-like protein kinase PERK1 373 581 - -
Alju05g1648 648 MobiDBLite consensus disorder prediction 211 225 - -
Alju05g1648 648 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Alju05g1648 648 Gene3D Phosphorylase Kinase; domain 1 259 372 - -
Alju05g1648 648 MobiDBLite consensus disorder prediction 127 145 - -
Alju05g1648 648 Gene3D Transferase(Phosphotransferase) domain 1 373 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1648 Alju-ChrAlju05 47540310 47545699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1648 105 641 Trihelix Transcription Factor Family AT1G70460 51.471 5.81e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju05g1648 PK_Tyr_Ser-Thr 4.3e-49 CL0016