Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1645 ATGGTAACACGTCTTTCTTTTCTAGCCGAACATCACTGTCATGGAGGTTTGGCTGCGACGGGGCCTGATAAAGAGGGGAGGCGGCTTCTATTTAACAATTCATCTGCGCGGCGCAAACGTTCTCAGCCACATTCTTCATTGCTTCTAGGGTTCTGTCTCCGCTTCGATGGTACCATTTTCTCTCTTCGTACCATTGGGAAGGGTACGGGAAGCTTCGGTAAGAGGAGGAACAAGACCCACACTCTGTGTGTGAGGTGTGGCCGCCGCAGCTTTCACATCCAGAAAAGTCGCTGCTCCGCCTGCGCTTTCCCTGCCGCTCGCAAAAGAAAGTATAACTGGAGTGTGAAGGCAATTCGCAGAAAGACTACCGGTACTGGTAGGATGAGGTACTTGCGTAATGTGCCTCGCAGATTCAAGAGTGGTTTCAGAGAAGGTACCGAAGCCGCACCTAGGAAGAAGGGAGCAGCTGCCACTGCTTAA 480 0.5188 MVTRLSFLAEHHCHGGLAATGPDKEGRRLLFNNSSARRKRSQPHSSLLLGFCLRFDGTIFSLRTIGKGTGSFGKRRNKTHTLCVRCGRRSFHIQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAAATA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1645 159 Hamap 50S ribosomal protein L37e [rpl37e]. 66 117 IPR001569 GO:0003735|GO:0005840|GO:0006412
Alju05g1645 159 ProSitePatterns Ribosomal protein L37e signature. 68 87 IPR018267 GO:0003735|GO:0005840|GO:0006412
Alju05g1645 159 Gene3D - 65 151 IPR011331 GO:0003735|GO:0005840|GO:0006412
Alju05g1645 159 SUPERFAMILY Zn-binding ribosomal proteins 66 119 IPR011332 GO:0006412
Alju05g1645 159 Pfam Ribosomal protein L37e 67 117 IPR001569 GO:0003735|GO:0005840|GO:0006412
Alju05g1645 159 PANTHER 60S RIBOSOMAL PROTEIN L37 66 158 - -
Alju05g1645 159 FunFam Ribosomal protein L37 65 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1645 Alju-ChrAlju05 47523785 47525457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1645 65 159 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.421 1.01e-57 173