Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1630 ATGGCGGCTGCTGCTTCGTCGTCATCCTCCTCCTCCTCCTCCTCCTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTTAGTTTCAGAGGTGAAGATACTCGCAGAACATTCATCAGCCATCTCTTCACCGCCTTGTGCCAAAAAGGAATTCGAACCTACATAGATAATGAGCTCCGGAAAGGGGATGACATCTCAGACGCACTTACCCAGGCAATTAAGGATTCAAGTATAGCTGTGGTGATCTTCTCTGAGAACTATGCCTCCTCAAAATGGTGTTTGAATGAACTCATCCGGATCCTTTGGTGTAAAGAGGTCCAAGGACAGATTGTTATTCCAGTTTTCTATCAAATTGACCCATCTCATGTGCGCAATCAGAGGCAAACTTACATGGAGGCCTTTGCTAAACATGAGAGAGACTTCAGGCTTAATCAAGACAGGGTGAACAAGTGGAAACAAGCTCTCTTTGTAACTGCCAATTTGGCTGGCTGGGACTCTCGAACCTCTAGGGACGAAGCAGAACTCATTCAAAACATTGTCAATGACGTTCAGCAAAAAATTAACCTCAGTTATCCAAGTTCGTTGATGGGTCTTGTTGGAATTGATGAAAATTGTGACAAGATTGAAAGGCTAATTGAAAAAGTCCCAATGATTGGAATTTGGGGCATGGGTGGTATAGGCAAGACAACCATGGCTAAGGCTTTGTTTGCCAAACTCTCCTTCAAATTTGAGAGTTCTTGCTTTTTGGAAAATATAAGAGAAGAGGAAGAAAAACGAGGATTGACATATTTACTGAACAATCTCTTCTCTGAGCTACTAAAAGAAGAAACTTCCCCTCATAGGCCACCCAATGTTTCAAATAACACCTTTGTTATGAGAAGACTAAGCTGTAAAAAAGTATTCATCGTGCTTGATGATGTTAGTAGTTGGAAGCAATTAGAGTATTTAGCCCCATATTGTGAATACTTGGGACTAGGCAGTAAAGTCATCATTACAACAAGGCATAAGCAATTGCTTGTAATTGCCAGAGTTAATAAAATATATGAGGCCCAGCCTTTGAGCGATCACAAATCTGTTGAGCTCTTCAACCTCAGAGCTTTCCACTCATACCTGCCAAAAACTGGTTATGAATCCATCTCACAAAGGATTGTTCATTATGCACAAGGCATCCCATTAGTTTTGGTAGTATTGGGTTCCTCTCTTCGTTCAAAAACTCCAAAGGAATGGGATAGTGCATTGTCAAAACTACAGAAAAGTCCAAATGAAGACATTCTAAAAGTTTTGAAATTGAGCTTTGATGGATTGAATTATGAAGAGAAGGAAATGTTTCTAGATATTGCATTTTTTTTGAACGGTGCAGAGAAAGAATATGTGATAACACTATCAGAAACTTTTGGTTTCCATGCGAGAATTGGGTTAGAAACCCTTGTAGATAGAACTCTTGTAACTATTGATGATAGCCAAGTACGGATGCATGCCTTAATAAAAGAAATGGGCTATGAAATTGTTCGTCAAGAATGTATCAAAGAACCTGGAAAACGAAGTAGATTATGTGATCCAAAAGACGTCCATCATGTGTTGAAAAATAATACAGGAACTGATACAATTGAAGGCATAGAATTAGATCTGTCCAAAATTAGACAAATACACTTGAGCAGTGATACCTTCAAAAAGATGCGTAATCTAAGATTTATAAAATTCTATTCGGTCAAGTATAGGAGATCCTGTAAGGTGGACTTATCTTCTGGCCTTGAGTTATTATCTGAGCAATTAAGGTACTTTCAATGGGATGGTTATCCTTTGAAGTCTTTGCCATCGGCATTTTGTCCAGATAAACTTGTGAAACTTTGCTTGCGAAACGGCCAAGTCAAAAAACTTTGGGATGGAGTGCAGGATTTTCTTCTTTCAGGGTTAAAAGTTCTTTCATTGAAGAATTGTGATAGACTACAATCTCTTCCAGAGCTTCCACCATCCATAGAAGAATTAGATGCCATCAACTGCCCATCATTAGAGACAATAACTCTCACTTCTGAGAAGGGATATTCATTGTCGCCAGAAGAAGGAATGATGGCTTTAACTCCCTATTCCTCAATTGGCTATCTTTTGGAGGAGCATTCACTTTCCTGCATTGAGGAATATGCTTATGTATCATTGAAGCGAGCGGCATATCTCAATCGAATTGGTGCTTTTTAAAGAGAGGATGATCAAGGTGTTAAAGGTAACCCTAAGCTTTCGTTTGAGTTTTCTGTTGTCTCTTATGATGAGAATTACCTTACAACCAAACATGACATGATAGAAGCATGTGGAGTTTGTCCAATATATGCTTCAGAATATTACAATTTCCTTCAACAAATGGAATTCGGGTTGGATTTGGGTAGTCAAAAAAAGAGTGGTTGTGATAATGATGAGAATTCACTTTATGGAATTATGGAATATGCTAGTTTCTCATTGAAGCAAGTATACAGCAATTTTGAAAGTGCATATATTTCTTTCCCTGAAATGCCGAATGAGCCAGTTGGGTTTCTTGACAAAACCACAGATGCTCGCTCACACCCTACAAAAATAAATTACTACCAATTCTTTATCGAAATGAAATGTGAAGGTGACTCAGGAACTAATGCAGGTCATACCTTTGTGTTCCTTGCACTTGCAAAAGCTGAGACTTTCATCTCATGA 2676 0.3886 MAAAASSSSSSSSSSSSLPPKKHDVFLSFRGEDTRRTFISHLFTALCQKGIRTYIDNELRKGDDISDALTQAIKDSSIAVVIFSENYASSKWCLNELIRILWCKEVQGQIVIPVFYQIDPSHVRNQRQTYMEAFAKHERDFRLNQDRVNKWKQALFVTANLAGWDSRTSRDEAELIQNIVNDVQQKINLSYPSSLMGLVGIDENCDKIERLIEKVPMIGIWGMGGIGKTTMAKALFAKLSFKFESSCFLENIREEEEKRGLTYLLNNLFSELLKEETSPHRPPNVSNNTFVMRRLSCKKVFIVLDDVSSWKQLEYLAPYCEYLGLGSKVIITTRHKQLLVIARVNKIYEAQPLSDHKSVELFNLRAFHSYLPKTGYESISQRIVHYAQGIPLVLVVLGSSLRSKTPKEWDSALSKLQKSPNEDILKVLKLSFDGLNYEEKEMFLDIAFFLNGAEKEYVITLSETFGFHARIGLETLVDRTLVTIDDSQVRMHALIKEMGYEIVRQECIKEPGKRSRLCDPKDVHHVLKNNTGTDTIEGIELDLSKIRQIHLSSDTFKKMRNLRFIKFYSVKYRRSCKVDLSSGLELLSEQLRYFQWDGYPLKSLPSAFCPDKLVKLCLRNGQVKKLWDGVQDFLLSGLKVLSLKNCDRLQSLPELPPSIEELDAINCPSLETITLTSEKGYSLSPEEGMMALTPYSSIGYLLEEHSLSCIEEYAYVSLKRAAYLNRIGAFXREDDQGVKGNPKLSFEFSVVSYDENYLTTKHDMIEACGVCPIYASEYYNFLQQMEFGLDLGSQKKSGCDNDENSLYGIMEYASFSLKQVYSNFESAYISFPEMPNEPVGFLDKTTDARSHPTKINYYQFFIEMKCEGDSGTNAGHTFVFLALAKAETFIS 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1630 891 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Alju05g1630 891 SUPERFAMILY "Winged helix" DNA-binding domain 423 528 IPR036390 -
Alju05g1630 891 PRINTS Disease resistance protein signature 217 232 - -
Alju05g1630 891 PRINTS Disease resistance protein signature 294 308 - -
Alju05g1630 891 PRINTS Disease resistance protein signature 387 401 - -
Alju05g1630 891 PRINTS Disease resistance protein signature 633 649 - -
Alju05g1630 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 704 IPR044974 GO:0006952
Alju05g1630 891 SMART till_3 22 161 IPR000157 GO:0007165
Alju05g1630 891 Gene3D - 19 187 IPR035897 -
Alju05g1630 891 Gene3D Ribonuclease Inhibitor 526 686 IPR032675 -
Alju05g1630 891 Pfam NB-ARC domain 216 422 IPR002182 GO:0043531
Alju05g1630 891 Gene3D - 352 436 IPR042197 -
Alju05g1630 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 446 IPR027417 -
Alju05g1630 891 Pfam TIR domain 22 193 IPR000157 GO:0007165
Alju05g1630 891 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 164 IPR035897 -
Alju05g1630 891 Gene3D - 188 346 IPR027417 -
Alju05g1630 891 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Alju05g1630 891 SUPERFAMILY L domain-like 540 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1630 Alju-ChrAlju05 47377041 47389826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1630 21 667 WRKY Transcription Factor Family AT4G12020 32.375 2.69e-90 313