Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1629 ATGTCTTCAAGAGAAGGCACAGGGCTAGAGCCTGCTTCTAATAATTATAAGAGCATTCTTGTTCCCTTTGACCTGGAGACATTTGAAGCTCAGCCAACACAAGACAATTTCCAGTCAGAAATTCTAGTTGTTTTGGTAAATTAATTGGAGAGACAGGCTTTTCTGTTTGTGTTTCAGTTGTCAGAGCCTCTTGTTGAAGTAAATTTGATTGTGATTGGGGCTAGGACATTGTACGGTGCAGTGAATTTGAGCTGCAGCAAGAGATTAGTCAACCCCGTGGTTGCCTATGCTTTGCTGGAGCCATTTTATGCTTGCTTTATCGGCTGGGAGCTTGATATGGGTCTGTGCTTTGGGTCTCTTGCCCACGACGACGGAGCGGCGTCTAGTATCAACAGAAATCCATATTCAGGTTCAGCGAGTGCTGACAGTAAGAACGTTGGGTTCTCTACTACGAGCAGCAGTGCTGCAAAGAGTCAATTTTCAGAACTAGCAAGTGGGAACCTCGGGGATTCCCTTCCTGCTCCCAATGGGCAAATTTTAGAAACTCCAAACCTGAAGGTATTTAGTTTTGTAGACTTGAAAGCAGCCACGAAGAACTTCAAACCCGATACATTGCTTGGTGAAGGTGGTTTTGGTAGAGTTCACAAAGGTTGGCTGGATGATAAGACACTGACACCATCTAGGGCGGGGTCTGGAATTGTGGCTGCTATTAAAAAATTGAACCCAGAAAGTATGCAAGGATTCCGAGAGTGGCAGTCAGAAGTCAATTTCTTGGGAAGGCTTTCCCATCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGATGCTGAGGAGCTGCTGCTTAACTATAATGCAAAAATTTCTGATTTTGGCTTGGCGAAACTGGGGCCATCGGAGGGAGAATCACATGTTTCAACTAGGGTTATGGGCTCTTATGGCTATGCTGCTCCAGAATATGTTACTACAGGGCACTTGTATGTGAAGAGCGATGTGTATGGCTTTGGTGTAGTGCTGCTTGAAATGCTGACAGGTTTGAGGGCACTTGATACGAAGCGACCAAGTGGGCAGCAGAATCTGGTTGAATGGGTGAAGCCGTATCTGTCGAGCAAGAGAAAGTTTAAAACAATTATGGACGCTAGGATTCAGGGTCAATATTCACTCAAGGCAGCATCACAGGCTGCTAAGCTTACTCTCAAATGCCTACAACCCGATCCTAAGCACCGTCCTTCCATGAAAAAAGTGGTTAAGGAATTGGAAGGCATTGAAGAATCAAAGACTAAGTAG 1284 0.4517 MSSREGTGLEPASNNYKSILVPFDLETFEAQPTQDNFQSEILVVLVNXLERQAFLFVFQLSEPLVEVNLIVIGARTLYGAVNLSCSKRLVNPVVAYALLEPFYACFIGWELDMGLCFGSLAHDDGAASSINRNPYSGSASADSKNVGFSTTSSSAAKSQFSELASGNLGDSLPAPNGQILETPNLKVFSFVDLKAATKNFKPDTLLGEGGFGRVHKGWLDDKTLTPSRAGSGIVAAIKKLNPESMQGFREWQSEVNFLGRLSHPNLVKLLGYCWDAEELLLNYNAKISDFGLAKLGPSEGESHVSTRVMGSYGYAAPEYVTTGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPSGQQNLVEWVKPYLSSKRKFKTIMDARIQGQYSLKAASQAAKLTLKCLQPDPKHRPSMKKVVKELEGIEESKTK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1629 427 Gene3D Transferase(Phosphotransferase) domain 1 281 427 - -
Alju05g1629 427 Pfam Protein tyrosine and serine/threonine kinase 204 280 IPR001245 GO:0004672|GO:0006468
Alju05g1629 427 Gene3D Phosphorylase Kinase; domain 1 173 280 - -
Alju05g1629 427 Pfam Protein kinase domain 283 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1629 427 SUPERFAMILY Protein kinase-like (PK-like) 184 420 IPR011009 -
Alju05g1629 427 ProSitePatterns Protein kinases ATP-binding region signature. 206 239 IPR017441 GO:0005524
Alju05g1629 427 FunFam Serine/threonine-protein kinase BIK1 170 285 - -
Alju05g1629 427 ProSiteProfiles Protein kinase domain profile. 43 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1629 427 PANTHER OS01G0588500 PROTEIN-RELATED 282 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1629 Alju-ChrAlju05 47314696 47321430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1629 186 418 Glycoside Hydrolase AT3G07070 37.248 1.20e-52 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju05g1629 Pkinase 5.9e-17 CL0016