Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1616 ATGTCAAGCTCAACAATGTCGGAGAAGCTTAAAAAATTCTTTAACTATTGCCTCTCCAAGCTCAAAAACTCTCGTCCCCAGATCCACCCAGCCTCTTCTTCATCTTCTTCTTCATTCCCAATCAAACGGATCCTCTCGGGTTGCAAGCAACCCAGAACCACTTCGTTCGCCGTCGCGAGGGGAAGCGACGACGACGCAGCAACTTTATCAGATGTTGATCGTTTTCTCTTTGAGAATTTCAAATCTCTATTCCTCGGCGACGACGAATATACTACCGAGAATAACGATAGCAACATCACCGATGACGGAGTTTCTGAAGAAAATCACGGAGATCCGATACCAGGATCCGATCGGGTCAACCCGATTTCACCGGATCTACTCGGTGACGTCAAGTCTTCGGATTCTGGGGGGAGCATTGTGTTATTGGCTTGGTCGGCGAACCACTATGAGGACTTCCTTCGATCGATGAAGGGAATGGTGGATGCGAGATTGAGAAATCACGGGAGGGTAGATTGGGGATTTATGGAGGAGATCTTGCTCTGTTATTTGAACCTGAACGAGAAGAAGACACACAAGTATGTGCTGAGTGCTTACGTGGATTTAATTAACGGTTTTCGTGAAAGCTCGTCGGAGAGAGCTCCGGCGGCAACGGCGAAGCCGAGGAGTGTTCGAACAATTAGGACTGGAAGGGAGATCGGGAGAAGCAAAATTGCAATTAGAGCAGTAGAGAAACAGGACTGA 741 0.4791 MSSSTMSEKLKKFFNYCLSKLKNSRPQIHPASSSSSSSFPIKRILSGCKQPRTTSFAVARGSDDDAATLSDVDRFLFENFKSLFLGDDEYTTENNDSNITDDGVSEENHGDPIPGSDRVNPISPDLLGDVKSSDSGGSIVLLAWSANHYEDFLRSMKGMVDARLRNHGRVDWGFMEEILLCYLNLNEKKTHKYVLSAYVDLINGFRESSSERAPAATAKPRSVRTIRTGREIGRSKIAIRAVEKQD 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1616 246 ProSiteProfiles OVATE domain profile. 141 204 IPR006458 -
Alju05g1616 246 MobiDBLite consensus disorder prediction 92 120 - -
Alju05g1616 246 Pfam Transcriptional repressor, ovate 145 203 IPR006458 -
Alju05g1616 246 NCBIfam uncharacterized plant-specific domain TIGR01568 144 203 IPR006458 -
Alju05g1616 246 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 205 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1616 Alju-ChrAlju05 46835645 46836385 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju05g1616 Ovate 2.9e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1616 05 46835645 46836385 Alju05g1616 05 46835645 46836385 ECH