Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1613 ATGGATGACACTGAGGATGATGCAAAGTATGCTCCTAACCCATATGATGTAAGTCATCACCAAGGTTATGGTTATTCAAGTAGTCAGAAACATCCTGTTGGGAGTTCTCAACATTCTCAGCCAGTTAGAAGTGAGTATGCTGAAGAAGATAATGATTATGAGGAAGAAGACAACGGAGAACAATTAGAACAGGAAGAAGAAGAAGAAGAAGACGAAGATGATGATGATGATGATGATGATGATGATGTTGATGCTGATGTTGATCAAGGTAACAGCAATCAAGTTCCCCAGAAAGATGGCGATGACAATGGTGATGATGAAGAAGATGATGACATTGATGAGAATGGGGATGGGGATGATAGTGATGATGATGACACTGCTACTGCTGATGATGATGATAGGCCGAAAAGTTACACCATAAGGATTGGAGATGATTTAGAATCTCACCCAAAAAAGAGAAAGCTGAAGAGTTTGATTTCAACTTATGAATTTGCGCCCCGTGTACCTGCGCCTGCAGCTGCAGCTCCTTCGGCTTCTAAACCATCATTTGGTGGCAGAAACTCCCTTACTGACTGGACTGAGCACGAGACGTTTGTTCTTCTTGATGCTTGGGGTGAGCGGTTTATTCAGCGTGGAAAAAAGAGTCTCCGGTCTGAGGAATGGCAAGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGGAATAGACTTGACACATTAAAGAAAAAATACAAAAAGGAGAAGGCGAAATTGGCAGAAATGGGTAGCGGAACCAGCAAATGGGTTTATTTTAGTAGGCTTGATAAGCTGTTGTCCTCTCCTCAACAAGAAGCTGGTCTATCTTGTGGTTTGGACTCAGGAGAGTATGTTTTCTCGAACCCTCGAGTTTATTTGAACCGTGCAAATGTGTTTGATGAAATGAGAGATAGTCCAGGGAATTCAGAGTCTACTGGTGAGGAAGACTCGGCTGGACTTCAACCAAAGAATAAAAGTTCTAGAAGGAACAATGATGATACTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAAATTCAGCGAGATATATGAGAAGATTGAAAATAACAAAAGGCAACAGATGGTGGAACTAGAAAAGATGAGGATGGAGTTCCACAAGGATTTGGAAATGCAGAAGAGGCAAATTTTCGAGAGAGTGCAGAACGAGATTGCGAAACTGCAGCAGAGAGATGAGGAGGAAAAAGACGAATCTGCTGATAATGTGAAACTGTCCATAACTGTGTGGACTAAATGA 1296 0.4128 MDDTEDDAKYAPNPYDVSHHQGYGYSSSQKHPVGSSQHSQPVRSEYAEEDNDYEEEDNGEQLEQEEEEEEDEDDDDDDDDDDVDADVDQGNSNQVPQKDGDDNGDDEEDDDIDENGDGDDSDDDDTATADDDDRPKSYTIRIGDDLESHPKKRKLKSLISTYEFAPRVPAPAAAAPSASKPSFGGRNSLTDWTEHETFVLLDAWGERFIQRGKKSLRSEEWQEVAERVKEVSKIERTDTQCRNRLDTLKKKYKKEKAKLAEMGSGTSKWVYFSRLDKLLSSPQQEAGLSCGLDSGEYVFSNPRVYLNRANVFDEMRDSPGNSESTGEEDSAGLQPKNKSSRRNNDDTSSFKLLADSIQKFSEIYEKIENNKRQQMVELEKMRMEFHKDLEMQKRQIFERVQNEIAKLQQRDEEEKDESADNVKLSITVWTK 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1613 431 Coils Coil 390 417 - -
Alju05g1613 431 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 179 413 IPR044823 -
Alju05g1613 431 MobiDBLite consensus disorder prediction 324 338 - -
Alju05g1613 431 ProSiteProfiles Myb-like domain profile. 192 249 IPR001005 -
Alju05g1613 431 MobiDBLite consensus disorder prediction 101 129 - -
Alju05g1613 431 Gene3D - 192 254 - -
Alju05g1613 431 MobiDBLite consensus disorder prediction 48 87 - -
Alju05g1613 431 MobiDBLite consensus disorder prediction 20 42 - -
Alju05g1613 431 MobiDBLite consensus disorder prediction 315 347 - -
Alju05g1613 431 Pfam Myb/SANT-like DNA-binding domain 191 278 IPR044822 -
Alju05g1613 431 MobiDBLite consensus disorder prediction 1 153 - -
Alju05g1613 431 MobiDBLite consensus disorder prediction 130 153 - -
Alju05g1613 431 FunFam trihelix transcription factor ASIL2 192 254 - -
Alju05g1613 431 Coils Coil 364 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1613 Alju-ChrAlju05 46819967 46821641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1613 353 409 Trihelix Transcription Factor Family AT3G14180 50.877 1.69e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju05g1613 Myb_DNA-bind_4 1.9e-21 CL0123