Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1591 ATGGAGCAGCCGGAAACCCATAATGGTCATCAGCACGTAATTGACATTACAAGAAGTAGTAATGACTTATCCGGCTCTACTCAAGATGACCAACATCATGAAATGCATTTGCCTCATTTGGAAGATCAACCATCAGTTGGCACGCAAGTTCCCACACATCAATCATCTTCATCTTCATCATCCAGGTTAAACTCTACAAATTCCTCATCAACAAGAAGAGGTGAGGGATATGGTCATCACAGAAGAAGCCCGCTGAATTCTGGACTATGGATTTCTGTTGAGCTTGTTGTCACTGTGGGTCAGATCATAGCATCTATTGTTGTCTTGTCAATTTCCAGGAATGAAAATCCCAAAGCTCCTCTTTTTGCATGGATTGTGGGTTATGCATCTGGTTGTGTTGCTACACTTCCTATTCTTTACTGTCGTTATCAAAATCGTAATCAGAGCTCCGGACGAAATTTATCTCAACCATCTCAAGGATCTTCTGGAAGCAATCCTTCAGAGCGGACTTCTTATACTGCAATCTCTGTTGCTCATGTTTCAGATGAGGAGAGTGGTCGTACTACAGAATCAACTGCAGTAAACACTGGGATTCCTGGAGCCTTTAGTTCTAGGTTTAATGGTTTAGTAGACCATTTCAAGATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTTGTGGGCAACGTCTGGATCTTTGGAGGTCACACTTCTCCTTCTGATGCTCCAAAATTATATAGATTATGTATAGTGTTTCTTACCTTCAGCTGCATTGGATATGCTATGCCATTTATACTATGTGCAACAATTTGTTGCTGCCTACCTTGCATAATTTCTGTTTTGGGAATTCGAGAGGACTTTTCTCAAACTAGAGGAGCCACAGTTGAATCTATCAATGCCCTTCCTATATATAAGTTCAGTTTGAAGAAAAACGTAAATAATGATGATCAGGATGGCAATACAGATATAGATGAAGGAGGGACCTTGGCTGCTGGGACAGAAAAGGAGCGATCCATATCGGGAGAAGATGCTGTTTGTTGCATTTGCTTGACAAAATATGCAGATGATGATGAGCTTAGGGAGCTACCTTGCTCCCATGTCTTCCATGTTGAGTGTGTGGACAAATGGCTAAAGATAAATGCATCTTGTCCTCTCTGTAAAAGCGAGGTTGGTACAAGTGTACTTTCGGCAGAGGAGTCCAGTCAGCATTAA 1212 0.4158 MEQPETHNGHQHVIDITRSSNDLSGSTQDDQHHEMHLPHLEDQPSVGTQVPTHQSSSSSSSRLNSTNSSSTRRGEGYGHHRRSPLNSGLWISVELVVTVGQIIASIVVLSISRNENPKAPLFAWIVGYASGCVATLPILYCRYQNRNQSSGRNLSQPSQGSSGSNPSERTSYTAISVAHVSDEESGRTTESTAVNTGIPGAFSSRFNGLVDHFKMALDCFFAVWFVVGNVWIFGGHTSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDFSQTRGATVESINALPIYKFSLKKNVNNDDQDGNTDIDEGGTLAAGTEKERSISGEDAVCCICLTKYADDDELRELPCSHVFHVECVDKWLKINASCPLCKSEVGTSVLSAEESSQH 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1591 403 ProSiteProfiles Zinc finger RING-type profile. 346 387 IPR001841 -
Alju05g1591 403 SUPERFAMILY RING/U-box 340 392 - -
Alju05g1591 403 SMART ring_2 346 386 IPR001841 -
Alju05g1591 403 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 390 - -
Alju05g1591 403 SMART ringv_2 345 387 IPR011016 GO:0008270
Alju05g1591 403 Pfam Ring finger domain 346 387 IPR001841 -
Alju05g1591 403 MobiDBLite consensus disorder prediction 149 169 - -
Alju05g1591 403 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 326 394 IPR013083 -
Alju05g1591 403 FunFam E3 ubiquitin-protein ligase 329 395 - -
Alju05g1591 403 MobiDBLite consensus disorder prediction 45 73 - -
Alju05g1591 403 MobiDBLite consensus disorder prediction 20 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1591 Alju-ChrAlju05 46519129 46521821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1591 7 393 C3H Transcription Factor Family AT1G80400 57.722 1.11e-160 456