Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1588 ATGTCGCCGGAGAGTACTGGCACCGCTCGCTCCGCCCAGTCCGACGTCACGGAGTTGAACCTGAAGGAGACGGAGCTCACCCTCAGCCTTCCCGGCACCAATAATATCACAACTAGCTCTAAACGTGCCTTTTCGGAAACCACCGTCTTCAGCCCAACGTCGTCGTCAACTAGTACCCCGGCACCTAAGGCACAAGCGGTGGGGTGGCCGCCGGTGAGGGCAAGCCGGAAGAACGCGATGAGGAGCTGCAAATACGTGAAGGTGGCCGTGGACGGAGCTCCATATCTGAGGAAAGTAGATCTTGAGAAGTATGAGAGCTATGATCAGCTGCTCATGGGTTTAGAGGCCATGTTTGGTTCCTTGACAATTCGCAATCACTTGAATGAGAGGAAGAAGATGATGGACCTTGGGAATGGGGCAGAGTACGTGCCCACGTATGAGGACAAAGACGGTGACTGGATGCTCGTGGGAGATGTACCTTGGAAGATGTTTGTTGAATCCTGCAAAAGAATCAGGTTGATGATAAAGTCAGAGGCCAGTGGCGTAGAAATTGGACGAACAGAGTTGAAGTTGAAGGAGAAAACGTGTTGTAATTAA 597 0.5193 MSPESTGTARSAQSDVTELNLKETELTLSLPGTNNITTSSKRAFSETTVFSPTSSSTSTPAPKAQAVGWPPVRASRKNAMRSCKYVKVAVDGAPYLRKVDLEKYESYDQLLMGLEAMFGSLTIRNHLNERKKMMDLGNGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMIKSEASGVEIGRTELKLKEKTCCN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1588 198 MobiDBLite consensus disorder prediction 1 69 - -
Alju05g1588 198 FunFam Auxin-responsive protein 78 186 - -
Alju05g1588 198 MobiDBLite consensus disorder prediction 1 63 - -
Alju05g1588 198 ProSiteProfiles PB1 domain profile. 83 178 IPR000270 GO:0005515
Alju05g1588 198 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 180 IPR003311 GO:0005634|GO:0006355
Alju05g1588 198 SUPERFAMILY CAD & PB1 domains 75 175 - -
Alju05g1588 198 Pfam AUX/IAA family 81 182 IPR033389 -
Alju05g1588 198 Gene3D - 77 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1588 Alju-ChrAlju05 46472101 46473266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1588 72 184 B3 DNA Binding Superfamily AT1G34390 31.034 4.73e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Alju05g1588 AUX_IAA 1.1e-44 CL0072