Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1548 ATGAATTACAACTTTAGAACCAAAGCAATTAAACTTTGCAAGAACATATATATAGAGCTAGCTATGGGCGATTTGAGTCATGATGAGAACCATATTAAGAGGCCACACAGAGCGAACCAGCCGGCTTGGCAGGCGATAAAGCGGCTCTGCTCAGAGCACAGCGGTGAAGTTAGACTCGACCAATTCCACCTCCTTCGCCGGCTTGGCTCCGGCGACATTGGGAACGTGTTCCTCTGTGAGATCAAGCACACAGTCATGAACCTTGATCGGTACGGTGGTGGTGGTGGTTACTATGCGTTGAAAGTTGTGGATAGAGAGTGTCTGAGAATGAAAAATAAGCTAAAGAGAGCTGATGTTGAGAGAAAAGTTTTGAGTGTTCTTGATCATCCTTCTCTTCCAACCCTATATGCTCAGTTTGATGCTTATCACTACTCGTGTTTGCTCATTGATTACTGCCATGGCGGTGACTTGTTCAGGCTTCAACAAAACCAGCCTAATCTTCGTTTTAGAGTCTCTGCTGCCAAGTTCTATGCAGCTGAGGTGCTTGTAGCTCTTGAATATCTGCATATGATGGGCATAATTTACAGAGACCTAAAGCCAGAGAATGTGCTTATTCAAGAAGACGGCCACGTCATGCTCTCTGACTTCGATCTCTCACTACTTCACTGTGAGTCTCATCCCAAGCTTCTAAAAGGAAGACTCGACCACAACATTACTGCAACAACAACAACAAAGAAGAAGAAGAAGAGTGCAAGTTTCTGTTGTGAAAACTCAGCGGAGGAAGGAGTCATAATCAGAAGGAGAAAGAAGATTAAGAAGAAGAAGGCATCATGTATAGTTGATGATGACGTGGAATTATCAGCAGAACCAATGAACGCAAGGTCCAACTCATTTGTTGGGACTCACGAATATTTAGCCCCAGAGATGATATTAAGGTTAGGACACGGTAGCGCAGTGGATTGGTGGGCGTATGGGGTGTTTCTGTACGAGCTGCTGTATGGGATCACTCCCTTCAAAGACAAAGACAACCAGAAGACAATGAGGAACATTATAGGGAAGACGTCGGTGAGGTTTCCGACATTAAGTACTGAGTTCAGAGACAAGGACGAGGATGATGATGAAGAAGAGATAGGGAAGGCACAAGATCTCATAAAACAGCTTCTGGTGAAGAATCCTAAGAAGAGATTAGGATCTACGAGGGGGTCTTGTGAGATTAAGAGACATGAATTCTTTGAAGCCACCAACTGGGCCTTAATCAGATCGAATAAACCTCCTATTGTCCCTAAACAAGAAACCAATTATAATGATGTATCAGTATTAGCTGACTTGGTCAGGGACAAAACTAAAATTGATTTCTTCTGA 1362 0.4354 MNYNFRTKAIKLCKNIYIELAMGDLSHDENHIKRPHRANQPAWQAIKRLCSEHSGEVRLDQFHLLRRLGSGDIGNVFLCEIKHTVMNLDRYGGGGGYYALKVVDRECLRMKNKLKRADVERKVLSVLDHPSLPTLYAQFDAYHYSCLLIDYCHGGDLFRLQQNQPNLRFRVSAAKFYAAEVLVALEYLHMMGIIYRDLKPENVLIQEDGHVMLSDFDLSLLHCESHPKLLKGRLDHNITATTTTKKKKKSASFCCENSAEEGVIIRRRKKIKKKKASCIVDDDVELSAEPMNARSNSFVGTHEYLAPEMILRLGHGSAVDWWAYGVFLYELLYGITPFKDKDNQKTMRNIIGKTSVRFPTLSTEFRDKDEDDDEEEIGKAQDLIKQLLVKNPKKRLGSTRGSCEIKRHEFFEATNWALIRSNKPPIVPKQETNYNDVSVLADLVRDKTKIDFF 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1548 453 Gene3D Phosphorylase Kinase; domain 1 60 151 - -
Alju05g1548 453 Gene3D Transferase(Phosphotransferase) domain 1 285 429 - -
Alju05g1548 453 Pfam Protein kinase domain 295 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1548 453 Pfam Protein kinase domain 62 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1548 453 Gene3D Transferase(Phosphotransferase) domain 1 152 222 - -
Alju05g1548 453 SUPERFAMILY Protein kinase-like (PK-like) 41 434 IPR011009 -
Alju05g1548 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Alju05g1548 453 ProSiteProfiles Protein kinase domain profile. 62 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1548 453 PANTHER FLIPPASE KINASE 1-RELATED 29 433 - -
Alju05g1548 453 SMART serkin_6 62 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1548 453 FunFam Serine/threonine-protein kinase OXI1 156 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1548 Alju-ChrAlju05 45739595 45741585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1548 12 434 AGC Kinase Gene Family AT2G26700 46.723 4.24e-137 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju05g1548 Pkinase 2.2e-29 CL0016