Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1520 ATGGCAGAAACTCATCTTCATGGGACTCTCCACGCCACCATTCATGAGGTGGATAAGCTCGGTGGTAGTGGAGATGGAAATATTTTCAGCATGCTGAAGCAAACAATCGAGGACACAGTTGGTGTAGGACAGGGATCATCCCAAATCTACGCAACCATTGATCTGGAGAAAGCAAGAGTGGGAAGAACCAGAGTGTTGGATAACACAAATTCCAATCTCAGATGGCAAGAATCTTTCCACATCTACTGTGCCCACGTGGCATCCCACGTCATCTTCACCGTCAAAGGCGTCAACAAGATCGGCGCCACTCTAATCGGCCGAGCCTACGTCACCGTCGACAGCATCATCGGCGGCGACCCCTACGACGAATGGCTCGACATCTTAAACGAGGACAAAGAACCCATAGGCTCCAAAATCCACGTCAAGCTCCAATACTTTGACGTCACTAAGGACAGAAACTGGAACCGAGGTATTAGAAGCCCTAAATACCCAGGTGTACCCTACACTTTCTTCTCACAAAGACAAGGCTGTAAGGTAACGTTGTACCAAGACGCTCATGTCCCTGAAGATTTTATCCCCAAAATACCTCTCTCAGACGGCAATAATTACCAACCTCACCGTTGTTGGGAAGATGTTTTTGACGCTATTTCTAAAGCAAAACACTTCATCTACATCACTGGCTGGTCTGTTTACACTGAGATTAAGCTCGTGAGAGATGCTAAGAGACCTAAAGATGGAGGTCACGTAACCCTAGGGCAACTTCTGAAGGAGAAAGCAAATGAAGGTGTTAGGGTTTTAATGCTTGTTTGGGACGATAGAACTTCTGTAAGTTTGTTAAAAAAAGATGGGTTAATGGCAACACATGATGAAGAAACTGAGATATTCTTTCAAGATTCTCAAGTTCACTGTGTTTTGTGTCCCCGTGATCCCGACGAGGGCGCCGGGAGTATAATCCAGGACGTTCAGACCTCTACCATGTTCACCCACCACCAGAAGATCGTGGTGGTGGACAGCGAGATGCCGGGACGGCGGTCGTCATCGTCGGGGAAGAGAAGGTTAATGAGTTTCGTCGGCGGGCTTGATTTATGCGACGGAAGATACGACACGGCGTTTCATTCGCTTTTCAGAACGTTAGACACGGCTCATCACGATGACTTTCATCAGCCTAACTTCGCCGGCGCCGACATCAACAAAGGCGGGCCCAGAGAGCCGTGGCACGACATACATTCTCGCCTAGAAGGGCCCGTTGCTTGGGATGTTTTGTTTAATTTTGAACAGAGATGGAGGAAGCAAGGGGGGAAAGATGTACTCATGTCACAAGGAGAACTCGAGGATATAGTTATTCCTCCGTCTCCAGTGATGTTCCCGGAGGATCACGAGACGTGGAACGTCCAGTTATTCCGGTCGATCGATGGCGGCGCCGCCTTTGGGTTCCCGGATAGCCCGGAAGAAGCGGCCGATGCCGGGCTGGTGAGCGGGAAAAACAACATAGTTGACCGGAGCATTCAGGACGCGTATATTCATGCGATAAGGCGAGCGAGGAAGTTCATTTACATAGAGAATCAGTATTTTCTGGGAAGCTCTTATGCGTGGAGCGGCGAAGAGGGCGACATAAAGCCAGAAGAAATTAATGCATTGCATGTGATACCAAAGGAGTTGTCACTGAAGATAGTGAGTAAGATTGAGGAAGGGGAGAGGTTTACGGTGTATGTGGTGGTGCCGATGTGGCCGGAGGGAATACCGGACAGCGGGTCGGTGCAGGCGATATTGGATTGGCAGAGGAGAACAATGGACACTATGTATAAGGATATTGTTGATGCCTTGGAGGCAAAGGGTATTAGGGAAGATCCTCGCAAGTACTTGACATTCTTCTGTCTGGGCAATAGGGAAGCGAAACAAGACGGCGAGTATGAACCACCGGAGCAACCAGAACCTGATTCTCCTTATGAAAAAGCTCAGAAATCTCGTCGCTTCATGATTTATGTTCACACCAAGATGATGATAGTGGATGATGAGTACATAATAGTGGGATCAGCGAACATAAACCAAAGGTCAATGGACGGAGCGAGGGACACAGAGATAGCGATGGGGGGATATCAGCCGTATCATTTGGCGACGAACAAGGGGCCGGCGAGAGGCCAGATACATGGATTCCGAAAGGCACTATGGTATGAGCATCTTGGGACAATGGAGGAGTGCTTCGATCACCCAGAAAGCGAAGAATGTGTGGAGAAGGTGAATCATATGGCTGATAAGTACTGGCAACTTTACGCAGATGAATCGTTAGATGAAGACCTTCCAGGTCACTTGCTGCGTTATCCTGTTAAGATTTCTAGGGAAGGACGAGTGCAACAACTTGGAGACTTTGAATTCTTCCCTGATACTCAGGCTCGTATTCTTGGGGCCAAATCTGACTACATGCCACCAATCCTTACTACTTAA 2442 0.4844 MAETHLHGTLHATIHEVDKLGGSGDGNIFSMLKQTIEDTVGVGQGSSQIYATIDLEKARVGRTRVLDNTNSNLRWQESFHIYCAHVASHVIFTVKGVNKIGATLIGRAYVTVDSIIGGDPYDEWLDILNEDKEPIGSKIHVKLQYFDVTKDRNWNRGIRSPKYPGVPYTFFSQRQGCKVTLYQDAHVPEDFIPKIPLSDGNNYQPHRCWEDVFDAISKAKHFIYITGWSVYTEIKLVRDAKRPKDGGHVTLGQLLKEKANEGVRVLMLVWDDRTSVSLLKKDGLMATHDEETEIFFQDSQVHCVLCPRDPDEGAGSIIQDVQTSTMFTHHQKIVVVDSEMPGRRSSSSGKRRLMSFVGGLDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFAGADINKGGPREPWHDIHSRLEGPVAWDVLFNFEQRWRKQGGKDVLMSQGELEDIVIPPSPVMFPEDHETWNVQLFRSIDGGAAFGFPDSPEEAADAGLVSGKNNIVDRSIQDAYIHAIRRARKFIYIENQYFLGSSYAWSGEEGDIKPEEINALHVIPKELSLKIVSKIEEGERFTVYVVVPMWPEGIPDSGSVQAILDWQRRTMDTMYKDIVDALEAKGIREDPRKYLTFFCLGNREAKQDGEYEPPEQPEPDSPYEKAQKSRRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDTEIAMGGYQPYHLATNKGPARGQIHGFRKALWYEHLGTMEECFDHPESEECVEKVNHMADKYWQLYADESLDEDLPGHLLRYPVKISREGRVQQLGDFEFFPDTQARILGAKSDYMPPILTT 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1520 813 SUPERFAMILY Phospholipase D/nuclease 489 743 - -
Alju05g1520 813 Pfam Phospholipase D Active site motif 659 685 IPR001736 GO:0003824
Alju05g1520 813 Pfam Phospholipase D Active site motif 325 366 IPR001736 GO:0003824
Alju05g1520 813 CDD C2_plant_PLD 2 146 - -
Alju05g1520 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 366 IPR001736 GO:0003824
Alju05g1520 813 MobiDBLite consensus disorder prediction 632 651 - -
Alju05g1520 813 Gene3D Endonuclease Chain A 473 700 - -
Alju05g1520 813 Gene3D Endonuclease Chain A 197 445 - -
Alju05g1520 813 FunFam Phospholipase D delta 199 446 - -
Alju05g1520 813 Pfam C2 domain 34 126 IPR000008 -
Alju05g1520 813 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 658 685 IPR001736 GO:0003824
Alju05g1520 813 Gene3D C2 domain 7 157 IPR035892 -
Alju05g1520 813 FunFam Phospholipase D 469 704 - -
Alju05g1520 813 PIRSF PLD_plant 1 813 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju05g1520 813 SUPERFAMILY Phospholipase D/nuclease 149 438 - -
Alju05g1520 813 SMART C2_3c 9 124 IPR000008 -
Alju05g1520 813 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Alju05g1520 813 Pfam Phospholipase D C terminal 731 803 IPR024632 -
Alju05g1520 813 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 148 IPR035892 -
Alju05g1520 813 PANTHER PHOSPHOLIPASE D 6 801 IPR015679 -
Alju05g1520 813 SMART pld_4 658 685 IPR001736 GO:0003824
Alju05g1520 813 SMART pld_4 325 366 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1520 Alju-ChrAlju05 45440980 45445464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1520 1 813 Phospholipase D Gene Family (Wang group) AT1G52570 73.594 0.0 1269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0847 11 10075735 10079025 Alju05g1520 05 45440980 45445464 CCT
Alju05g1520 05 45440980 45445464 Alju11g0847 11 10075735 10079025 ECH
Alju08g0800 08 6014866 6018772 Alju05g1520 05 45440980 45445464 ECH
Alju05g1520 05 45440980 45445464 Alju05g1520 05 45440980 45445464 ECH