Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1509 ATGGCTTTTTGCCCTATATTTTTCTGTGCAAAGGGTCTGGATCGAAAAGCACGTGGGAAGAAAGTACCTCCATGGAGGGTCTTCTCTTTGAAAGAGTTACTTTCAGCGACAAATAATTTTAACTATGATAACAAGCTTGAAGAGGCAGAATTTGGCAGTGTCTACTGGGGCCAGCTTTGGAATGGATCACAAATTGCAGTTAAGAGATTGAAAGTTTGGAGCGACAAGGCTTACACAGAATTTGCCATTGAAGTTGAAATATTGGCAAGAGTACAACACAAGAATCTTGTTAGCCTACGTGGATATTGTGCTGAGGAGCAAGAAAGGCTAATTGTATATGACTATATGCCAAATTTCAGCCTCTTCTCTCAGCTTCATGAACAGCATCCTGAAGAATGCCTTCTTGATTGGAACAAACGGATGAACATTGCAATCGGGTCATCCGAGGGCATCGCATATCTTCACCACCAAGCAACACCACAAATAATCCATAGAGATATCAAAGCAAGCAATGTACTACTTGATTCAGATTTCCAAGCTCGGATTTCTGGTTTTGAATTTGCGAAGTTGATTTCAGATCAGACAACCCATGTGAGAACCAATGTTAAGGGAACTTTAGGCTACCTTGCACCAGAATATGCTTTGCTTGGTAAGGCATCCGCAAGTTGTGATGTTTACAGCTTTGGAATTTTGTTGCTGGAACTTGCTAGTGGCAAGAGACCAATTTTTAAACCGAGTGCCACAACGAAACAATCAATATATGATTGGGCACTTCCTTTGGCCTATGAGAAGAAATTTAGTGAGATTGCAGATTCAAAGCTTAACGGAAATTTTGTGGAGGAAGAACTTAACAGAGTGATTCTCATTGGACTTGTATGTGCTCAAAGTCAACCTGAGAAGAGACCAACCATGGTTGAGGTGGTAGAGATGCTTAAGGGAGAATCTAAGGATAAGTTATCTCAATTAGAAAAGAATGAATTGTTCACAAACCCTTCAACATTGAAAAACAAAAATGGGCTTCTTGTCTCATAA 1032 0.4012 MAFCPIFFCAKGLDRKARGKKVPPWRVFSLKELLSATNNFNYDNKLEEAEFGSVYWGQLWNGSQIAVKRLKVWSDKAYTEFAIEVEILARVQHKNLVSLRGYCAEEQERLIVYDYMPNFSLFSQLHEQHPEECLLDWNKRMNIAIGSSEGIAYLHHQATPQIIHRDIKASNVLLDSDFQARISGFEFAKLISDQTTHVRTNVKGTLGYLAPEYALLGKASASCDVYSFGILLLELASGKRPIFKPSATTKQSIYDWALPLAYEKKFSEIADSKLNGNFVEEELNRVILIGLVCAQSQPEKRPTMVEVVEMLKGESKDKLSQLEKNELFTNPSTLKNKNGLLVS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1509 343 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Alju05g1509 343 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1509 343 Gene3D Phosphorylase Kinase; domain 1 14 115 - -
Alju05g1509 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Alju05g1509 343 CDD STKc_IRAK 51 313 - -
Alju05g1509 343 PIRSF ILK 10 327 - -
Alju05g1509 343 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Alju05g1509 343 Pfam Protein tyrosine and serine/threonine kinase 42 311 IPR001245 GO:0004672|GO:0006468
Alju05g1509 343 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1509 343 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 334 - -
Alju05g1509 343 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Alju05g1509 343 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1509 Alju-ChrAlju05 45233290 45235812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1509 28 315 Receptor kinase-like Gene Family AT1G60800 44.483 2.77e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Alju05g1509 PK_Tyr_Ser-Thr 6e-40 CL0016