Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1499 ATGGCGGATTTTATTAGTCAAACTGGCATAATCCAAGGGGAGAACCCACTTCCTCCTGCTGTTGGAATGGAATTTGAGACTTATGAGGATGTATATTATTTCTATAATTGCTATGCCAAGGATCAAGGATTCGGGGTTCGAGTAAGTAATACTTGGTATAGGAAGAGCAAGGAACGGTACAGAGGAAAATTCAGCTGCAGTAGTGCTGGGTTCAAGAAAAGAAGTGAAGCGAATCGCCCAAGACCTGAAACAAGAACCGGTTGTCCGGCAATGATAAAGTTCAGGCTGACAGATTCCAAAAGGTGGAGAATTATAGAAGTGGAGCTTGAGCATAATCACTTGATAAGCCCAACCAGTGGAAAGTTCTACAAATCTCATAAGCGCCTGGGTTTGGGAACCAAAAGAGCATTGCAATTGGACAGTACTGAAGAACTTCAGAAAATTAGACTATTTCGAACTGTGATTGTTGATGGGGAGACTAATGGAAGTGTAGATGTTGATGAAGGACAACTCAAAAGCAAAGCTGTATGGTCCAATCAATTGAAGCTGAATAAAGAAAAACTGAGGGGATTGGTAGAATATGAGGCAGTGAAAGCAGCAATTAGTGGAGCAGTTTATTACTCTCTAAGAACTGAGGAATTCGATGCAGCTTGGGAGGACATGATGCAGCAATATGAAATTAGAGGCCATGAGTGGCTTCAAGCGTTATGCGAAGATAGGAAACGGTGGGTCCCGGCTTATGTGAAGGAAACCTTCTTGGCGGGAATGTTTCCAATAGAACCAAGTGACACGGCACCATGGTTTTTTGAGGGCTACTTGAGTAAACAAACTCCTCTGAAGGAATTTCTTGAAAAATATGACCAAGCTTTGGAGACAAAGTGGCAGCACGAAGCACTCGCAGATCTAGACTCGAAAAATTCAAGCTTTATGCAAAAACCAAGGTGTTACTTTGAGTTGCAGATCTCAAAACTGTACACAAATGAACTATTCCGAATGTTTGAAAGGGAAATAAAAGGAATGTACTCCTGTTTAAGCAGCAGACAGCTAAATGTGGATGGGCCAGTGATCTCATACCTCATCAAGGAACAAATTGAAGTTGAAGTTGAAGGAAATCATCAGAGAGTTACAAGAGATTATGAGGTGTATTACAATGGGTCTGAAATGGAGGTCCTTTGCATTTGTGGTTTGTTCAACTTCAAAGGAATATTGTGTAGGCATGCACTATCTGTCTTAAACCAGAATGGTATAGAAGAGATTCCACCTCAGTACATTCTCTCAAGATGGAGAAAAGATGTGAAGCGAAGTTATGTTATTGATCACAAATCTAGTGGCATTGATATTGATAACCCAGCTCATAGGTATGACCATTTGTATAGACGCATAGTTCAGGTTGTGGAGGAAGGTGGTAAATCGCATGGCCGTTTCAGGACTGCTATGCAAGAATTCAATGAGATATTGGACAAACTTAAACGTGTAAATTTGGAGGACCATGCAATATAG 1500 0.41 MADFISQTGIIQGENPLPPAVGMEFETYEDVYYFYNCYAKDQGFGVRVSNTWYRKSKERYRGKFSCSSAGFKKRSEANRPRPETRTGCPAMIKFRLTDSKRWRIIEVELEHNHLISPTSGKFYKSHKRLGLGTKRALQLDSTEELQKIRLFRTVIVDGETNGSVDVDEGQLKSKAVWSNQLKLNKEKLRGLVEYEAVKAAISGAVYYSLRTEEFDAAWEDMMQQYEIRGHEWLQALCEDRKRWVPAYVKETFLAGMFPIEPSDTAPWFFEGYLSKQTPLKEFLEKYDQALETKWQHEALADLDSKNSSFMQKPRCYFELQISKLYTNELFRMFEREIKGMYSCLSSRQLNVDGPVISYLIKEQIEVEVEGNHQRVTRDYEVYYNGSEMEVLCICGLFNFKGILCRHALSVLNQNGIEEIPPQYILSRWRKDVKRSYVIDHKSSGIDIDNPAHRYDHLYRRIVQVVEEGGKSHGRFRTAMQEFNEILDKLKRVNLEDHAI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1499 499 SMART 26again6 390 417 IPR006564 GO:0008270
Alju05g1499 499 Pfam SWIM zinc finger 379 412 IPR007527 GO:0008270
Alju05g1499 499 Pfam FAR1 DNA-binding domain 34 115 IPR004330 -
Alju05g1499 499 ProSiteProfiles Zinc finger SWIM-type profile. 379 415 IPR007527 GO:0008270
Alju05g1499 499 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 191 490 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1499 Alju-ChrAlju05 45137193 45139136 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju05g1499 FAR1 1.2e-21 CL0274