Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1497 ATGACCGGCGATACTTCGTATTCTGCAGACAACAAGAGCTTGTCGCCGAGTCAAAACCTCGACATCACGATAGAGGAAGGATCTCCAAACAGTGAGCAATTGCTTGATGTTGAGGATGAGTGCAATGACTTTGAAAATGACTGTGGGCAGCTATTTGAGATTGATGGAGATGATCATGAAAATGGGAGAGATGAAACGGATCTTGTTGATTTTCATGATGGGGAATCTCAAGTTAAAGACTACCGTCCACCAGTAGTAGGGATGGAATTTGATACATATGATGATGCCTATAATTACTACAATAGCTATGCCAAGGAACTTGGATTTGCTATTAGGGTTAAATCATCATGGACCAAACGTAACAGCAAAGAGAAACGTGGTGCTGTGCTCTGCTGCAACTGTGAGGGTTTCAAAACAGTCAAGGAAGCAAATAGCCGCAGGAAAGAAACAAGAACAGGTTGTTTGGCTATGATTAGGTTGAGATTAGTGGAATCTAACAGGTGGAGAGTGGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACACAAGAGGACGGAAAGCGGGGCCAAAAGAATGATTGAGCCAACTTTAGACGTTGAAGTAAGAACAATCAAGTTATACAGAACGCCTGTAATGGATTCATCAGGTTATAGAAGCTCAAATGCTAATGAAGAAGGAACTTATGACCACACTAAATTTTCCAGGCATTTAAAACTTAGAGAAGGGGATGCACAAGTTATTGCAAACTACTTCTGCCGCAAACAAATGATGAATCCTAATTTTTTCTATGTGATGGACCTGACTGATGATGGGCGTATGAGGAACGTCTTTTGGATTGATTCAAGATCAAGGGCTGCATATGGTTACTTTGGTGATGTGGTTGCAATTGACTCAACATGTTTGTCAAACAATTATGAGATTCCACTGGTTGCATTTGTTGGTGTCAATCACCATGGGCACTCTATTTTATTTGGATGTGGTCTGCTTGCTGATGAGTCATTTGAAACATACATATGGTTGTTTAGGGCATGGCTTACATGTATGTCTGGTCGCCCTCCACAAACTATCATTACAAATCAGTGTAAAACCATGCAAAGTGCAATAACTGAGGTTTTCCCAAGAGCCCACCATAGAATTTGTCTTTCACAAGTCATGCAGAGCATCCTTGGAGACTTTGCACTGTCACAAGAATATGATGCATTTCAGATGGCGTTGACGAAAGTGATGTATGAATCTAAAACAGTTGATGAATTTGAGAGGGCTTGGGAGGATTGGACTCAACATTTTGGAATAAGCAATCATGAGAAGCTCCAAACCCTACATGAAGAACGGGAGCGTTGGGCCCCAGTTTATTCCAAGGACACATTTTTTGCTGGAATTTCTGATTACGTAAAGGATGAGGCGACAAGTCCCTTTTTCTATGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGACATTTTGGAATCAGTTTTACAAGAGCAGCATAGAAAAGAAGCTCTTGCTGATTTAGAGTCGAGAGATTCAACACCCTTACTGAAAACAAAATCCTACTATGAGTTGCAGCTCTCAAAACTATACACAAATGCAGTATTCAACAAGTTCCAAGATGAAGTGGTGATGATGTCTTCTTGTCTCAGCATCACAGAATTCCAAACAAATGGGTCTATAGTGACGTACATAGTTAAAGAACACATAGAGGAAGAATCAGTGAGTGATCTCAGGCAATTGGAAGTCATGTATGATAAAGCTGGAGCAGAAGTTCGGTGCGGCTGCAACTGCTTTAACTTCAAGGGCTATCTATGCCGGCACACCTTGTGTATCCTTAATTACAACGGCGTGGAGGAAATTCCATGTCAGTATATTTTGTCAAGATGGAGGAAGGATTATAAGAGATTGTATGTACCAAATCTGAGCTCCAATAACGCTGATATCACCAACCCTGTTCAGTGTTATGATCATTTGTACAGACGCGCTATGCAAGTTGTTGAAGAAGGAATGGTATCCCAAGATCATTATATGGTTGCTTGGCAGGCATTTAAAGAGTCATTGAACAAGGTTCGCCTTGTAGCTGCTGATAAGATTGATTAA 2127 0.4062 MTGDTSYSADNKSLSPSQNLDITIEEGSPNSEQLLDVEDECNDFENDCGQLFEIDGDDHENGRDETDLVDFHDGESQVKDYRPPVVGMEFDTYDDAYNYYNSYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRTESGAKRMIEPTLDVEVRTIKLYRTPVMDSSGYRSSNANEEGTYDHTKFSRHLKLREGDAQVIANYFCRKQMMNPNFFYVMDLTDDGRMRNVFWIDSRSRAAYGYFGDVVAIDSTCLSNNYEIPLVAFVGVNHHGHSILFGCGLLADESFETYIWLFRAWLTCMSGRPPQTIITNQCKTMQSAITEVFPRAHHRICLSQVMQSILGDFALSQEYDAFQMALTKVMYESKTVDEFERAWEDWTQHFGISNHEKLQTLHEERERWAPVYSKDTFFAGISDYVKDEATSPFFYGHVHQQTSLKEFFDILESVLQEQHRKEALADLESRDSTPLLKTKSYYELQLSKLYTNAVFNKFQDEVVMMSSCLSITEFQTNGSIVTYIVKEHIEEESVSDLRQLEVMYDKAGAEVRCGCNCFNFKGYLCRHTLCILNYNGVEEIPCQYILSRWRKDYKRLYVPNLSSNNADITNPVQCYDHLYRRAMQVVEEGMVSQDHYMVAWQAFKESLNKVRLVAADKID 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1497 708 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 700 IPR031052 GO:0006355
Alju05g1497 708 Pfam FAR1 DNA-binding domain 98 182 IPR004330 -
Alju05g1497 708 ProSiteProfiles Zinc finger SWIM-type profile. 587 625 IPR007527 GO:0008270
Alju05g1497 708 Pfam MULE transposase domain 303 396 IPR018289 -
Alju05g1497 708 SMART 26again6 600 627 IPR006564 GO:0008270
Alju05g1497 708 MobiDBLite consensus disorder prediction 1 29 - -
Alju05g1497 708 MobiDBLite consensus disorder prediction 179 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1497 Alju-ChrAlju05 45132069 45134924 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju05g1497 MULE 3.4e-27 CL0219