Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1467 ATGGAGAATATCTTCTGGCACGCCAGCCACCTTCCGTATCTGGGAACAAATGACGATGGTGAGCAACTTCTGTGGCCTCATCAACAAAGCAATACTACTTCACAGAACCCTGATGATGATGACTTGATATTGTCTCATATCAAATCCTATAATCATGTGTGTTTTGATAACTCTGATGTTGTTATTGATAGAGTACCAATTATTAGTACGGAACAAGAATATGGTGATGGAGATGATGATGATGATATTTCTGGGAATCAATTATTTGGGAGTAGAAGGAAGGGAGGAACAAGGAAGGCGCGTGGTGGTCTTAGTAGGAGCCCTAAATGTGGGACGACATCATTAGATCACGTAATGGCTGAGAGAAAAAGAAGGCATGAATTGGCTGAGAAATTCATTGCTCTTTCGGCTACTATTCCTGACTTAAAAAAGAAGGACAAGGCATCAGTACTTGATGGAGCCATCAATTACGTGAAGCAACTTCAAGAACGAATCACAGAGTTAGAGGAGAAAGGCAACAAGAAGAAGAGAAGCATAGAGGAAGCATATACTTGTGAACACAACAACAGCCACGAGGACGACGATGTGGTGCCTGCTGACGTGGAAGCAAGAGTTTCAGGGAGAGAAGTACTCATAAGAATTCGATGTAAGAAACAAAATGGAATTATGGGCAACATTGTGTCGCTCCTTCAAAACTCTCATCTCACTATAACCCATAGCAGCGTATTGCCATTTGGAAATACTACTCTCTACATCACCATTATCACCCAGATGCGTGATGAATACGGCTTGACAGTGAATGATCTGGTGAAGAATTTGAGACGATATCTCTTTAATTTACCTGAGGTTGCATGCTAG 858 0.4161 MENIFWHASHLPYLGTNDDGEQLLWPHQQSNTTSQNPDDDDLILSHIKSYNHVCFDNSDVVIDRVPIISTEQEYGDGDDDDDISGNQLFGSRRKGGTRKARGGLSRSPKCGTTSLDHVMAERKRRHELAEKFIALSATIPDLKKKDKASVLDGAINYVKQLQERITELEEKGNKKKRSIEEAYTCEHNNSHEDDDVVPADVEARVSGREVLIRIRCKKQNGIMGNIVSLLQNSHLTITHSSVLPFGNTTLYITIITQMRDEYGLTVNDLVKNLRRYLFNLPEVAC 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1467 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 116 180 IPR036638 GO:0046983
Alju05g1467 285 Gene3D - 112 178 IPR036638 GO:0046983
Alju05g1467 285 SMART finulus 118 167 IPR011598 GO:0046983
Alju05g1467 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 112 161 IPR011598 GO:0046983
Alju05g1467 285 MobiDBLite consensus disorder prediction 72 109 - -
Alju05g1467 285 Pfam Helix-loop-helix DNA-binding domain 117 162 IPR011598 GO:0046983
Alju05g1467 285 Coils Coil 151 178 - -
Alju05g1467 285 PANTHER BHLH TRANSCRIPTION FACTOR 81 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1467 Alju-ChrAlju05 44627535 44631128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1467 22 280 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 34.768 1.10e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1467 HLH 3.4e-09 No_clan