Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1465 ATGGAGTTTCCATGGCAGAATTGGTTCTCAGATCTGGATATGGATGAGACTGGATTCTTCAATAATCAATCACAACACAAGACTTACTCATTTGATGATGATGACGATGATGATGATGAGTTTCTTAAAGAGATCTTTCATCAACCTTGTTTCTCCTCTGAGAGTGACAGTACTCACTCTTCCTCTATTCAAAACATCAATGTCACTACCGCTGCCGCGTCAAATGTTGGTGGTGGTTCCGCCGTTGCTACTACCCCCACCACCACCACCGTTAGCAGCTTACCTTTGGATATTAACTCCGGAGGCGGTTACCGGAGACATGAGTCCGCCGTGAAGAGTGGTCATCAAGAGAAATTGGAGAGTAGTACAGGAGGAGGAGGAGGAGGCACAATGCGCGCTTCTCAAAAACGAACCCTAGAAAACCGTGATAGTGATAGTCATCAGCCAAAAATTAATAACCAAGGGACAAAGAGGACTAGAAATTCATCTGAGACACTGGATCACGTAATGGCTGAGAGAAAAAGGAGACAAGAACTCACCGAGAAGTTTATTGCACTCTCAGCTACAATCCCGGGTCTCAAGAAGATTGACAAGGCTTCTATACTAAGCGAGGCGATAATTCACGTGAAGCAACTTCAAGAGCGTGTGAAAGAGTTAGAGGAACAGAACAAGAAGATGATAAATAGTACTGTGAAGTCATCTTTGTCGTACAAGATGAAGAAGAAGAAGAAGAAGATGAAAAAGAAATCATCATTGTTTATTAATGAAGCACTTCCTGAAGTTGAAGCAAGAGTTTTACACAGAGAAGTCCTCATCAGAATCCACTGTGAGAATCAGAAAGGCATTATTCTTAACTTATTGGCTCAGCTACACAGTCTTCATTTCTCCATAATCACTCATAGTGCCTTGCCATTTGGTAACTCCATTCTTGATATCACCGTTATTGCCAAGGGTGATGAGGAACACAACATACCAGTGGAGGAACTTGTGAAAAAGCTGAAGATGACCCTCTTGAAGAAGTCAGTTGATTGA 1032 0.4234 MEFPWQNWFSDLDMDETGFFNNQSQHKTYSFDDDDDDDDEFLKEIFHQPCFSSESDSTHSSSIQNINVTTAAASNVGGGSAVATTPTTTTVSSLPLDINSGGGYRRHESAVKSGHQEKLESSTGGGGGGTMRASQKRTLENRDSDSHQPKINNQGTKRTRNSSETLDHVMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKMINSTVKSSLSYKMKKKKKKMKKKSSLFINEALPEVEARVLHREVLIRIHCENQKGIILNLLAQLHSLHFSIITHSALPFGNSILDITVIAKGDEEHNIPVEELVKKLKMTLLKKSVD 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1465 343 SMART finulus 169 218 IPR011598 GO:0046983
Alju05g1465 343 MobiDBLite consensus disorder prediction 75 165 - -
Alju05g1465 343 Gene3D - 161 241 IPR036638 GO:0046983
Alju05g1465 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Alju05g1465 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 227 IPR036638 GO:0046983
Alju05g1465 343 PANTHER BHLH TRANSCRIPTION FACTOR 20 340 - -
Alju05g1465 343 Coils Coil 202 229 - -
Alju05g1465 343 MobiDBLite consensus disorder prediction 75 97 - -
Alju05g1465 343 Pfam Helix-loop-helix DNA-binding domain 168 213 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1465 Alju-ChrAlju05 44545713 44548505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1465 151 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 42.647 1.84e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1465 HLH 2.7e-08 No_clan