Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1464 ATGGATAATGCTGAAGACTTCCACGGCCAATTTTGTCACATGAAGATGTCTTTTGATGAGGAAGACGAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCTGCAGCTGGTGGAAATAGAATTAGTAATAATAATAAGAATAATAATCACTTGTCATCTTCTTCTTCTTCTCAAAGCAGAGATAAATCATCCTTTCCCACCGTCGATTTCTCTATCGACAGCTCTGGCGTCAACCGTCATGGTGGTGGTGGTTCGAATGAGAACGACAAAAGCCACGTGTTGTCTGCTAATAAAGCATACATTTTAGCATTTGATCACTCCAACGTATTACCAGCAGAAGGAGAAGGAATCCCAAAACGCGAAGAATCTAGCACCTCCGAACTTTGTTCATTGAAAAGGAACAGAGATCAGACATGTAATAATGTTGTTGAGCCAAGAAAGAAGACTAGAAGCCGTGCGGAGACAGCGAATCACATCATGGCCGAGAGGAGGAGGAGGCAACAACTCACAGAGAGATTTATTGCACTTTCTGCAACTATTCCGGGCTTGAAGAAGGTCGGTTTTTTTCTTCTTTTTTTTCCAAAAAAATCTTCCTTTGTTCTTCAAATTTTCAATTGTTTAATGATGGACAAAGCCACGATTCTTCAAGAAGCGACGAAATACGTGAAGCAGCTTCAAGAACGAGTAACAGAGCTAGAGAAACAAAATGGCATAATAATAAACACCACTTATTCATCATCATCAGATCAGAAATCATTGATGATGAGATCGATAAAGAAATATTGTGAGCTACACAGAGTTAATATTAATGATGATGATGATAAGTGTTGTGAAGCCAAAAAAGAAGCGTTGCCTCAGATTGACGCAAAAGTGTTGGAGAATCAAGTGCTGTTTGGGATCTATTGTGAGAAGCAAAAGGGCATTGAGTTTAAAATATTGAATTTGCTTGAGAGTTTTCATCTTTATGTCACTAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGAATCACCATCATTGCCCAGGAGGAGGAAAAACTGGAAGCCAGTGACTTGAGTGCATTCTAG 1071 0.3987 MDNAEDFHGQFCHMKMSFDEEDEEFLRNILQQQPAAGGNRISNNNKNNNHLSSSSSSQSRDKSSFPTVDFSIDSSGVNRHGGGGSNENDKSHVLSANKAYILAFDHSNVLPAEGEGIPKREESSTSELCSLKRNRDQTCNNVVEPRKKTRSRAETANHIMAERRRRQQLTERFIALSATIPGLKKVGFFLLFFPKKSSFVLQIFNCLMMDKATILQEATKYVKQLQERVTELEKQNGIIINTTYSSSSDQKSLMMRSIKKYCELHRVNINDDDDKCCEAKKEALPQIDAKVLENQVLFGIYCEKQKGIEFKILNLLESFHLYVTSSSVLPFGNSTLGITIIAQEEEKLEASDLSAF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1464 356 MobiDBLite consensus disorder prediction 36 91 - -
Alju05g1464 356 Gene3D - 143 239 IPR036638 GO:0046983
Alju05g1464 356 Pfam Helix-loop-helix DNA-binding domain 156 226 IPR011598 GO:0046983
Alju05g1464 356 Coils Coil 215 242 - -
Alju05g1464 356 PANTHER BHLH TRANSCRIPTION FACTOR 24 348 - -
Alju05g1464 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 237 IPR036638 GO:0046983
Alju05g1464 356 SMART finulus 159 231 IPR011598 GO:0046983
Alju05g1464 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 153 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1464 Alju-ChrAlju05 44382354 44385652 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1464 97 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 33.992 8.70e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1464 HLH 6.6e-09 No_clan