Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1462 ATGGATGAGATAGGATTCTACAATAATCAATCACAACACAAGACTTGCTCATTTGATGATGATGAAGATGATTTTCTTAAAGAGATCTTTCATCAACCTTGTTTCTCTTCTGAGAGTGACAGTACTCACTCTTCCTCTATTCAAAACAACAATGTCACCACCACAGCCGCATCATATGGTGTTGGTGTCTCCGCCGCTGCTACTACCCCCACCACCACCACCACTGTTAGCAGCTTACCTTTGGATATTGACTCCGGAGACGGCGCCGGCCAACTGAAACCTAACGGCTCGGGCTCATCATTCCTCTCGATACTTGGAAGCTTCTCGGACAACAAACCTGCAGTAGCCACATCGTCTCCGTCATCTTATATTCTCTCTTTTGGTAACTCAACAGTACTACGAACCACCTCCGGCGAAGGTTACTGGAGACATGAGTCCGCCGTGAAGAGTGGTAATCAAGAGAAATTGGAGAGTAGTACAGTACGAGGAGGAGGCAGCACAATGCGCACTTCTCAAAAACAAACCTTAGAAAACCATAATAGTGATAGTCATCAGCCAAAAACTAATAACCAAGGGACAAAGAGGACTAGAAATTCATCTGAGTCATTGGATCACATAATGGCCGAGAGAAAAAGGAGACAAGAACTGACTGAGAAGTTTATTGCTCTCTCAGCTACAATTCCAGGTCTCAAGAAGATTGACAAGGCTTCTATATTAAGCGAAGCGATAATTCACGTGAAGCAACTTCAAGAGCGTGTGAAAGAGTTAGAGGAACAGAACAAGAAGATGATAAATAGTACTGTGGAGTCATCTTTGTCGTACAAGATGAAAAAGAAGAAGAAGAAGACGAAGAAGAAGTCATCATTGTTTATTAATGGAGCACTTCCTGATGTTGAAGCAAGAGTTTTACACAGGGAAGTTCTCATCAGAATCCACTGTGAGAATCAAAAAGGCATTATTCTTAACTTATTTGCTCAGCTACACAGTCTTCATTTCTCCATAATCACTCATAGTGCCTTACCATTTGGTAACTCCATTCTTGATATCACCATTATTGCTGAGGTTGGTGAGCAACACAACATACCAGTGGAGGAACTTGTGAAAAAGCTGAGAGTTCTCTTGAAGAAGTCAGTTGACTGA 1140 0.4219 MDEIGFYNNQSQHKTCSFDDDEDDFLKEIFHQPCFSSESDSTHSSSIQNNNVTTTAASYGVGVSAAATTPTTTTTVSSLPLDIDSGDGAGQLKPNGSGSSFLSILGSFSDNKPAVATSSPSSYILSFGNSTVLRTTSGEGYWRHESAVKSGNQEKLESSTVRGGGSTMRTSQKQTLENHNSDSHQPKTNNQGTKRTRNSSESLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKMINSTVESSLSYKMKKKKKKTKKKSSLFINGALPDVEARVLHREVLIRIHCENQKGIILNLFAQLHSLHFSIITHSALPFGNSILDITIIAEVGEQHNIPVEELVKKLRVLLKKSVD 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1462 379 Gene3D - 188 265 IPR036638 GO:0046983
Alju05g1462 379 Coils Coil 239 266 - -
Alju05g1462 379 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
Alju05g1462 379 SMART finulus 206 255 IPR011598 GO:0046983
Alju05g1462 379 Pfam Helix-loop-helix DNA-binding domain 205 250 IPR011598 GO:0046983
Alju05g1462 379 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 266 IPR036638 GO:0046983
Alju05g1462 379 PANTHER BHLH TRANSCRIPTION FACTOR 31 374 - -
Alju05g1462 379 MobiDBLite consensus disorder prediction 145 202 - -
Alju05g1462 379 MobiDBLite consensus disorder prediction 152 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1462 Alju-ChrAlju05 44300003 44303139 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1462 204 374 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 43.085 1.17e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1462 HLH 3.1e-08 No_clan