Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1457 ATGTGACATATGGATGATGCTGAAGACTTCCACGGTCAATTTTGTCACATGATGATGTCTTTTGATGAGGAAGATGAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCTGCAGCTGGTGGAATTAATATTAGTAATAATAATAAGAATAATAATCACTTCTCTTCTTCTTCTTCTCAGAGCAGAGATAAATCATCTTTTCCCACCGTCGATTTCTCTATCGAAAGCTCTGGCGGCAACTGTCATGGTGGTGGTGGTTCGAATGAGGACGAAAAAAGCCGTGTGTTGTCTGCTAATAAAGCATTCATTTTAGCATTTGATCAATCCAACGTATTACCAGCAGAAGAAGAAGGAATCCCAAAACGCGAAGAATCTAGCACCTCCGAACTTTGTTCATTAAAAAGGAACAGAGATCAGACATGTAATAATGTTGTTGAGCCAAGAAAGAAGACTAGAAGCTGGGCGGAGACAGCGAATCACATCATGGCCGAGAGGAGAAGGAGGCAACAACTCACAGAGAGATTTATTGCACTTTCTGCAGCTATTCCGGGCTTGAAGAAGATGGACAAAGCCACGGTTCTTCAAGAAGCGACGAAATACGTGAAGCAGCTTCAAGAACGAGTAACAGAGCTAGAGAAGCAAAATAGCATAATAATAAATACTTCTTCATCATCATCATCAGATCAGAAATCGTCGATGAGATCGATAAAGAAATATTGTGAGCTGCACAGAGTTAATATTGATGATGATGATGACAAGTGTTGTGAAGCCAAAAATGTAGTGTTGCCTCAGATTGATGCTAAAGTGTTGGAGAATCAAGTGCTGTTTGGGATCTATTGTGAGAAGCAAAAGGGCATTGAGTTTAAAATATTGAATTTGCTTGAGAGTTTTCATCTTTATGTCACTAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGTATCACCATCATTGCCCAGATGGGGGAGGAATACAAAATGACAGTGAATGAAGTGATGAAAAACCTACGACGAGTGCTATCAAAGTCGCAGGAGGCAGTTGATTCGTACTAG 1056 0.4062 MXHMDDAEDFHGQFCHMMMSFDEEDEEFLRNILQQQPAAGGINISNNNKNNNHFSSSSSQSRDKSSFPTVDFSIESSGGNCHGGGGSNEDEKSRVLSANKAFILAFDQSNVLPAEEEGIPKREESSTSELCSLKRNRDQTCNNVVEPRKKTRSWAETANHIMAERRRRQQLTERFIALSAAIPGLKKMDKATVLQEATKYVKQLQERVTELEKQNSIIINTSSSSSSDQKSSMRSIKKYCELHRVNIDDDDDKCCEAKNVVLPQIDAKVLENQVLFGIYCEKQKGIEFKILNLLESFHLYVTSSSVLPFGNSTLGITIIAQMGEEYKMTVNEVMKNLRRVLSKSQEAVDSY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1457 351 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 155 204 IPR011598 GO:0046983
Alju05g1457 351 Gene3D - 146 219 IPR036638 GO:0046983
Alju05g1457 351 PANTHER BHLH TRANSCRIPTION FACTOR 37 343 - -
Alju05g1457 351 Coils Coil 194 221 - -
Alju05g1457 351 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 218 IPR036638 GO:0046983
Alju05g1457 351 SMART finulus 161 210 IPR011598 GO:0046983
Alju05g1457 351 MobiDBLite consensus disorder prediction 39 93 - -
Alju05g1457 351 MobiDBLite consensus disorder prediction 39 83 - -
Alju05g1457 351 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1457 Alju-ChrAlju05 44046799 44050036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1457 151 342 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.147 8.72e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1457 HLH 1.3e-10 No_clan