Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1456 ATGGAGGTTCCATGGCAGAATTGGTTCTCGGATCTGGATATGGATGAGACTGGATTCTTCAATAATCAATCACAACACAAGACTTACTCTTTTGATGATGATGATGATGAGTTTCTTAAAGATATCTTTCACGAAACTTGTTTCTCTTCCGAGAGTGACAGTACTCACTCTTCCTCCGTTCAAACCAACGCAGCGTCAGATGGTGGTGGTTCCGCCTTTGTTACAACCCCCACTACCACCGTGAGTAGCTTATCTTTGGATATTGACTCCGGAGGCGGCGCCAGCCAGCTGAAACCTAACGGCTCGAGCTCAGTCCTCTCGAGACTTGGTAGCTTCTCAGACAATAAACCTGTGGGAGCCTCATCGTCTCCGTCGACTTATATTCTGTCTTTTGATAACTCAACTGTACTACCAGCCACCTCTGGCGATGGTTACCGGAAACATGAATCCGCCGTGAAGAGTGGTAATCAAGAGAAATTAGAGAATAGTACAGGAGGAGGAGGAGGAGGCGGCGGCACACGCGCTTCTCAAAAACGAACCCTAGAAAACCAAAATTGTGATAATCATCAGCCAAAAGCTAATAATCAAGGGACAAAGAGGACTAGAAGTTCATCTGAGACACTGGATCACATAATGGCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTTATTGCACTCTCAGCTACAATTCCTGGTTTAAAGAAGATTGACAAGGCTTCTATACTAAGCGAAGCTATCATTCACGTGAAGCAACTTCAAGAGCGTGTGAAAGAGTTAGAGGAACAGAACAAGAAGATCATGATCAGTACTATGGATCCTATGTCGTACAAGATGAATAAGAAGAAGAAATCATTGTCATCGTCGTCGAGCAATAATAATAATAAAAGTAATAATGAAGATCAAGACACGACGACCTCTGATATTGATGATGATTACTTTAGAATTAATGAAGCACTTCCTGAAGTTGAAGCAAGAGTTTTACACAGGGAAGTTCTCATTAGAATCCACTGTGAGAATCAGAAAGGCGTTATTCTTAACTTGTTGGCTCAGCTACACAGTCTTCACTTCTCCATTATCACTCATAGTGCCTTGCCATTTGGGAATTCCATTCTCGATATTACCATTATTGGTGAGGTTGATGAGGAACACAACATACCAATGAAGGAAGTTGTGAAAAAGCTGAGAATGAATCTGTTGAAGAAGAAGCCATAG 1218 0.422 MEVPWQNWFSDLDMDETGFFNNQSQHKTYSFDDDDDEFLKDIFHETCFSSESDSTHSSSVQTNAASDGGGSAFVTTPTTTVSSLSLDIDSGGGASQLKPNGSSSVLSRLGSFSDNKPVGASSSPSTYILSFDNSTVLPATSGDGYRKHESAVKSGNQEKLENSTGGGGGGGGTRASQKRTLENQNCDNHQPKANNQGTKRTRSSSETLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELEEQNKKIMISTMDPMSYKMNKKKKSLSSSSSNNNNKSNNEDQDTTTSDIDDDYFRINEALPEVEARVLHREVLIRIHCENQKGVILNLLAQLHSLHFSIITHSALPFGNSILDITIIGEVDEEHNIPMKEVVKKLRMNLLKKKP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1456 405 MobiDBLite consensus disorder prediction 282 303 - -
Alju05g1456 405 MobiDBLite consensus disorder prediction 140 208 - -
Alju05g1456 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 205 254 IPR011598 GO:0046983
Alju05g1456 405 MobiDBLite consensus disorder prediction 176 202 - -
Alju05g1456 405 Gene3D - 203 274 IPR036638 GO:0046983
Alju05g1456 405 MobiDBLite consensus disorder prediction 49 72 - -
Alju05g1456 405 Coils Coil 244 271 - -
Alju05g1456 405 SMART finulus 211 260 IPR011598 GO:0046983
Alju05g1456 405 Pfam Helix-loop-helix DNA-binding domain 210 255 IPR011598 GO:0046983
Alju05g1456 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 275 IPR036638 GO:0046983
Alju05g1456 405 PANTHER BHLH TRANSCRIPTION FACTOR 44 403 - -
Alju05g1456 405 MobiDBLite consensus disorder prediction 279 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1456 Alju-ChrAlju05 43999552 44002701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1456 194 400 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 43.128 3.94e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1456 HLH 3.4e-08 No_clan