Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1455 ATGGAGTTTCCATGGCAGAATTGGTTCTCGGATCTGGATATGGATGAGACTGGATTCTTCAATAATCAATCACAACATAAGACTTCCTCATTTGATGATGATGATAATGAGTTTCTTAAAGAGATCTTTCATCAACCTTGTTTTTCTTCTGAGAGTGACAGTACTCACTCTTCCTCTATTCAAAACAACAATGTCGCCACCGCCGCCGCATCATATGATGGTGGTGGTTGTTCCGCCGCTGGTACTATCCCCACCACCACCGTTAGCAGCTTACCTTTGGATATTGACTCTGGAGGCGGCGCCGGCCAGCTAAAACCTAACGGCTCGGGCTCATCAATCCTCTCGATACTTGGAAGCTTCTCGGACAACAAACCTGCAATAGCCACATCGTCTCCGTCAACTTATATTCTCTCTTTTGATAACACAACAGTTCTACGAGCCACCTCCGGCGAAGGTTACCGGAGACATGAGTCCGCCGTGACGAGTAGTAATCAAGAGAAATTGGAGAGTAGTACGGGAGGAGGAGGAGGCAGCACAATGCGCGCTTCTCAAAAACGAACCCTAGAAAACCATAATAATGATATTCATCAGCCAAAAACTAATAATCAAGGGACTAAGAGGACTAGAAATTCATCTGAGACACTGGATCACATAATGGCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTTATTGCACTCTCAGCGACGATTCCTGGTTTGAAGAAGATTGACAAGGCTTCTATACTAAGCGAAGCTATAATTCACGTGAAGCAACTTCAAGAGCGTGTGAAAGAGTTACAGGAACAGAACAAGAAGATGATGAATAGTACTGTGGAGTCATCGTCGTCGTACAAGATGATGATGAAGAAGAAGACGAAGAAGAAGTCATCATTGTTGTCGTTGAGCAATAATAATAATGATGATGATGATGATCAAGAGACGACCTCTGATATTGATGATTATTACTTCAGAATTAATGATGCAATTCCTGAAGTTGAAGCGAGAGTTTTACACAGGGAAGTTCTCATCAGAATCCACTGTGAGAATCGGAAAGGCATTATTCTTAACTTATTGGCGCAGCTACACAGTCTTCATTTCTCCATAGTCACTCATAGTGCCTTGCCATTTGGTAACTCCATTCTTGATATCACCATTATTGCTGAGGGTGATGAGGAACACAACATACCAGTGGAGGAACTTGTGAAAAAGCTGAGAATGATTCTCTTGAAGAAGTCAGTTGACTGA 1251 0.4269 MEFPWQNWFSDLDMDETGFFNNQSQHKTSSFDDDDNEFLKEIFHQPCFSSESDSTHSSSIQNNNVATAAASYDGGGCSAAGTIPTTTVSSLPLDIDSGGGAGQLKPNGSGSSILSILGSFSDNKPAIATSSPSTYILSFDNTTVLRATSGEGYRRHESAVTSSNQEKLESSTGGGGGSTMRASQKRTLENHNNDIHQPKTNNQGTKRTRNSSETLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEAIIHVKQLQERVKELQEQNKKMMNSTVESSSSYKMMMKKKTKKKSSLLSLSNNNNDDDDDQETTSDIDDYYFRINDAIPEVEARVLHREVLIRIHCENRKGIILNLLAQLHSLHFSIVTHSALPFGNSILDITIIAEGDEEHNIPVEELVKKLRMILLKKSVD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1455 416 PANTHER BHLH TRANSCRIPTION FACTOR 27 413 - -
Alju05g1455 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 215 279 IPR036638 GO:0046983
Alju05g1455 416 MobiDBLite consensus disorder prediction 272 287 - -
Alju05g1455 416 Coils Coil 251 278 - -
Alju05g1455 416 Pfam Helix-loop-helix DNA-binding domain 217 262 IPR011598 GO:0046983
Alju05g1455 416 MobiDBLite consensus disorder prediction 272 291 - -
Alju05g1455 416 MobiDBLite consensus disorder prediction 194 209 - -
Alju05g1455 416 MobiDBLite consensus disorder prediction 151 213 - -
Alju05g1455 416 SMART finulus 218 267 IPR011598 GO:0046983
Alju05g1455 416 Gene3D - 209 288 IPR036638 GO:0046983
Alju05g1455 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 261 IPR011598 GO:0046983
Alju05g1455 416 MobiDBLite consensus disorder prediction 155 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1455 Alju-ChrAlju05 43951673 43954571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1455 201 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.991 1.55e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1455 HLH 3.5e-08 No_clan