Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1453 ATGGCTCTCCTTCTCCAACTCAGAACGAGAACCAAAAGGACTACCTTCACAAATCCTTCTCTCTTCCATTTCTTCTCTACCTCCAATTCCAACGACTATGAACCCGAATCTACCGCCACCTCCTCCGACGATACTCCTTCTAAAAATTCTAATTCTCCTTACTCTTCTTATTTCAGCGATGTCAAGAAGGTTCTCAAACAGGGACAATCTACTTCCACCTTTTTCACCCCAAGAAATCCCTCAAATTCATCTTTCAATGCTTCCGGTTCTGCTTCTCCCGTACCATCCAAAGCTGCTTCTCTCGATGAAATCCGTAAGAACCTAACCCAGTTTCGGCGCCGTGTCTCGGACACGGACCCTGATTCAACGCCTCCGTCTTCGTCTTCGTCTTCATCTTCATCGGATCAAATCTCATTACAGGAGATCTACAGGAGAAATATGGATGGAAAACCTGGAGGAAGACTTGATTTCGAAGCCATTCGTGAAAGCGTGCGGAGTAGAAGGCAGAATGTTCAGCCCTCTGGGACTGACAGGAAAGACGGGGGACTATCGTCGTTTTCGGCATTTTCCCGGAGTTTAAGAAAAGAGCCTTCAGACTCCACTGGTTCGTCGACGTTAATTGGGGGAACGGCATTGCCGGCGTCGGTTTTTGGCAAGGAGTTGAGGGAGAAGGAGAGGGGAGAGAAGTCCGATGAAATGAAGGTGGCGTTTCTGAAGACATATAAGCATGAGGAGTTGGGAGAGAAATTGAAAAAATTGAGGCCGCCGGCAAAAGGAAGGGACTGGTTTTCTCTGAGGGAATTGAATGATAGGTTGGTGAAATTGAGGGAAATGGATGAGAAGGAGAATGCACAATCAACCCCTGATGTCTTTGGCCTCACGGATTTGAGAAATGTCTTGAATAAGCTGAAGGAGTCTGACAATCAGGAAAGGAAAACTTCACTGCAGAGACTTGATATCTTGAGTGAGCTTGGCCGGACCCCAAGCTTCATGCTGCAGCCTCCGAAGGAGCATCTTGTTGAAAAGTATTTCCATCCAGACAATATGTCTTCAGCAGAAAAGTTGAAAATTGAGCTTGCAAGAGTTAGGGATGAGTTTAAAATGTCTGAGTCAGATTGTGGATCATTTCGTGTTCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCATCAGTACTACACAAGAAGGATAAGCATTCTCGTAAAGGCTTGATAGCGATGGTTCAGAAGAGGAAAAGGTTACTGAAATACCTCAGAAGAACTGACTGGGATTCCTACTGTTTTGTGATTTCCAGGCTTGGTCTACGTGATAATCCTGATACTAAGTACTGA 1335 0.4517 MALLLQLRTRTKRTTFTNPSLFHFFSTSNSNDYEPESTATSSDDTPSKNSNSPYSSYFSDVKKVLKQGQSTSTFFTPRNPSNSSFNASGSASPVPSKAASLDEIRKNLTQFRRRVSDTDPDSTPPSSSSSSSSSDQISLQEIYRRNMDGKPGGRLDFEAIRESVRSRRQNVQPSGTDRKDGGLSSFSAFSRSLRKEPSDSTGSSTLIGGTALPASVFGKELREKERGEKSDEMKVAFLKTYKHEELGEKLKKLRPPAKGRDWFSLRELNDRLVKLREMDEKENAQSTPDVFGLTDLRNVLNKLKESDNQERKTSLQRLDILSELGRTPSFMLQPPKEHLVEKYFHPDNMSSAEKLKIELARVRDEFKMSESDCGSFRVQVAQLTTKIKHLSSVLHKKDKHSRKGLIAMVQKRKRLLKYLRRTDWDSYCFVISRLGLRDNPDTKY 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1453 444 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 443 - -
Alju05g1453 444 NCBIfam 30S ribosomal protein S15 361 437 IPR005290 GO:0003735|GO:0005840|GO:0006412
Alju05g1453 444 MobiDBLite consensus disorder prediction 166 185 - -
Alju05g1453 444 Gene3D - 404 439 - -
Alju05g1453 444 SMART Ribosomal_S15_2 359 437 IPR000589 GO:0003735|GO:0005840|GO:0006412
Alju05g1453 444 MobiDBLite consensus disorder prediction 27 56 - -
Alju05g1453 444 Hamap 30S ribosomal protein S15 [rpsO]. 349 438 IPR005290 GO:0003735|GO:0005840|GO:0006412
Alju05g1453 444 SUPERFAMILY S15/NS1 RNA-binding domain 359 438 IPR009068 -
Alju05g1453 444 Gene3D - 355 402 - -
Alju05g1453 444 Pfam Ribosomal protein S15 362 437 IPR000589 GO:0003735|GO:0005840|GO:0006412
Alju05g1453 444 MobiDBLite consensus disorder prediction 164 185 - -
Alju05g1453 444 Coils Coil 265 285 - -
Alju05g1453 444 CDD Ribosomal_S15p_S13e 361 435 IPR000589 GO:0003735|GO:0005840|GO:0006412
Alju05g1453 444 MobiDBLite consensus disorder prediction 120 137 - -
Alju05g1453 444 Coils Coil 352 372 - -
Alju05g1453 444 MobiDBLite consensus disorder prediction 70 95 - -
Alju05g1453 444 MobiDBLite consensus disorder prediction 70 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1453 Alju-ChrAlju05 43876257 43878581 Dispersed