Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1437 ATGGATCATCATAAGGACGATTTTTTAAATGAACTCAGCCTCTATGACTCAATTTATGAGGAGGACGACCTCCTTAGGGAGATCCTTCACCAACCTTGTTTCTCTTCCGTGAGTGACATTATCAACACCCTCACCACCGCTGATACTGGTGGTGCCGCCGTAACAACCACCACTGTCAGTAGCTTATCCTCCGGCGCCAGCCAATCCAAACATGACAGCCCCAGTTCGGGACATGCTAGTATATGCGACAAACCGGCAACGACATCTTCTTTGTCAACTTATATTCTATCTTTTGATAACTCAACGGTAATACCGGCGACCGCTGATGACGCCGGTGTTTATGAGAAACATGAAGCTGCAAACACGCGTGCTTCTTCGCTAAAACGGACACCAGAAAACAATGAGAGTGAGTCAAAGGCCCATCAAAAGATAAGGAAGAGTAGAAGTTCATCTGAGACATTGGATCACATAATGTCTGAGAGAAAAAGGAGACAAGAACTCTCTCAGAAGTTTATTGCACTTTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGTCGTCCGTGCTAAGCGAAGCTATCAATTACGTGAAGAAACTTAAAGAACGAGTGAAAGAGTTAGAGGAAGAGAACAAGAAGATAAGAGAAGATAGGGAATCATTATTAATATCATGCATAAATAAATCACCATGCAACCACCTCAATGCTAAGGATAATGATCATCATCATCATCATCAAGACACAATATCTTCTTCTGAAACAATGAGTAGCTCTGATGATAATTCCTTCAAAATAATCAACGAAGGATTGCCTGAGGTTGAAGCAAGATTCTTACACAACCAAATTCTCATGAGAATCCACTGTGAGAAGCACAACACTGTGATGCTTGCTATATTCGCCCGACTCAAGAGCCTCCATCTCTCCATTATCAACTCTAGCGTCTTAGACTTTGCCAATTCTGCCCTTGACATCACCATTATAGCTGAGGTTGATGAACACAAAATAGAAGTGAAGGAAGTTGTGAAAGAGCTTCGATTGGCCCTGTTGGAAACCAATCACAACCAATAA 1068 0.4204 MDHHKDDFLNELSLYDSIYEEDDLLREILHQPCFSSVSDIINTLTTADTGGAAVTTTTVSSLSSGASQSKHDSPSSGHASICDKPATTSSLSTYILSFDNSTVIPATADDAGVYEKHEAANTRASSLKRTPENNESESKAHQKIRKSRSSSETLDHIMSERKRRQELSQKFIALSATIPGLKKIDKSSVLSEAINYVKKLKERVKELEEENKKIREDRESLLISCINKSPCNHLNAKDNDHHHHHQDTISSSETMSSSDDNSFKIINEGLPEVEARFLHNQILMRIHCEKHNTVMLAIFARLKSLHLSIINSSVLDFANSALDITIIAEVDEHKIEVKEVVKELRLALLETNHNQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1437 355 Pfam Helix-loop-helix DNA-binding domain 156 200 IPR011598 GO:0046983
Alju05g1437 355 MobiDBLite consensus disorder prediction 118 154 - -
Alju05g1437 355 MobiDBLite consensus disorder prediction 237 259 - -
Alju05g1437 355 Gene3D - 145 222 IPR036638 GO:0046983
Alju05g1437 355 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Alju05g1437 355 MobiDBLite consensus disorder prediction 62 81 - -
Alju05g1437 355 PANTHER BHLH TRANSCRIPTION FACTOR 23 350 - -
Alju05g1437 355 SMART finulus 157 206 IPR011598 GO:0046983
Alju05g1437 355 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 154 221 IPR036638 GO:0046983
Alju05g1437 355 Coils Coil 190 224 - -
Alju05g1437 355 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1437 Alju-ChrAlju05 43743632 43746697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1437 128 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.991 2.28e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1437 HLH 6.3e-08 No_clan