Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1433 ATGACTGACAGTATAATCAACACCATCACCACCGCAGATGCTGGTGGTGCCTCCCTAACAACCACCACTGTCAGTAGTTTATCCTCCGGCGCCAGCCAATCCAAGCATGACAGCCCCAGTTCGGGACTTGCTAGCCTGTGTGACAAACCGGCGGGAACCTCATCTTCGCAGTCATCTTATATTCTATCTTTCCATAACTCAACTATAATACCGGCGACCCCAGATGATATCGCTGGTTATGAGAAACATGAAGCTGCAAACGCGTGTGCTTCTTTGCTAAAGCAGACAACAGAAAACAATGAGAGTGAGTCAAAGGCCCATCAAAAGATAAGGAAGAGTAGAAGTACATCTGAGTCATTGGATCACATAATGTCTGAGAGAAAAAGGAGACGAGAACTCTCTCAGAAGTTTATTGCCCTCTCAGCTACAATTCCTGGTTTGAAGAAGATTGACAAGTCATATGTACTAAGCGAAGCGATCAATTACGTGAAGAAACTTAAAGAACGAGTGAGAGAGTTAGAGGAAGAGAACAAGAAGATAAGAGATGATAGCAAGTCATTATTAAAGTCAAGCATAAATAAATCACCATGCAACCACCTCAATGCTAAGGATAATCATCATCATCAAGACACAATATCTTCTTCTGAAACAATGAGTACCTCTGATGATAAATGCTTCAAAATAATCAACCAAGGATTGCCTGAGATTGAAGCAAGAGTGTTACACAACCAAATTCTCATCAGAATCCTCTGTAGGAAGCACAACAGTGTGATGCTTACTATATTGGCCCAACTCAATAGCCTCCATCTCTCCATTATCAGCTCTAGCATTTTACACTTTGCCAATTCCGTTCTTGACATCACCATTATAGCTGAGGTTGAGGAACACAAAATAGAAGTGAAGGAAGTTGTGAAAAAGCTTCGATTGGCCCTGTTGGAGACCTCTCAACCAATGTAA 957 0.419 MTDSIINTITTADAGGASLTTTTVSSLSSGASQSKHDSPSSGLASLCDKPAGTSSSQSSYILSFHNSTIIPATPDDIAGYEKHEAANACASLLKQTTENNESESKAHQKIRKSRSTSESLDHIMSERKRRRELSQKFIALSATIPGLKKIDKSYVLSEAINYVKKLKERVRELEEENKKIRDDSKSLLKSSINKSPCNHLNAKDNHHHQDTISSSETMSTSDDKCFKIINQGLPEIEARVLHNQILIRILCRKHNSVMLTILAQLNSLHLSIISSSILHFANSVLDITIIAEVEEHKIEVKEVVKKLRLALLETSQPM 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1433 318 Gene3D - 112 190 IPR036638 GO:0046983
Alju05g1433 318 MobiDBLite consensus disorder prediction 198 218 - -
Alju05g1433 318 MobiDBLite consensus disorder prediction 100 122 - -
Alju05g1433 318 MobiDBLite consensus disorder prediction 27 50 - -
Alju05g1433 318 PANTHER BHLH TRANSCRIPTION FACTOR 30 313 - -
Alju05g1433 318 SMART finulus 123 172 IPR011598 GO:0046983
Alju05g1433 318 MobiDBLite consensus disorder prediction 96 122 - -
Alju05g1433 318 Pfam Helix-loop-helix DNA-binding domain 122 166 IPR011598 GO:0046983
Alju05g1433 318 Coils Coil 156 190 - -
Alju05g1433 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 117 166 IPR011598 GO:0046983
Alju05g1433 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 181 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1433 Alju-ChrAlju05 43705726 43708942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1433 19 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.906 2.40e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju05g1433 HLH 7.1e-07 No_clan