Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1424 ATGAGAACGACGCTATGAGTGATTAGGGTATGGGATGGCAAGGGATTCTCAGAGTGTTTTGAAGATATATATCCTTATTTTCTGAATTTGGCATCAGTTTCTGAATGGATTAAATTGCTTTATATAAATTTCTTTTCCTTAATAACACCCACGGTTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAATTGTTTTGGTTGGATGCATTCACAAGAGCAGTCGAGGAATTCAAAGATCAGACTCTCAGATGGGCCTTTTGAAGAAGCTTTTCCTGTTTGTTATACCAGCTGTTGGAGCATGTGCTTCATTGTTGGACATAATTTTTCTATGGAAGAGAGAAATTAACAGGCACTTTGTTGGATATCATAATTGGTTTTATAGCTGTTCTGAGTTGATGGTTTGGACAAATATCATTATCTTCTCAAGGTGCGTCAGCAGTCATTACATGCTCTGCAACAATGTCTTGTGTTACTGGTGGATTCTGAAACCACTATTCTGGATCTTCCATTTGCTTAAAAAGTTCCCATTGTTGGAGACTTCAATATGTGTGGTGGAAAGCTTTATTCTTCTCCTAGATATCTCATTTGGCATATCCATCAATGTCATAAGAATAAAGATGTTGTCTCCCAAAAACAGTTCATTTGAAGATCCACTTCTTTCTAATGATAAGGACCTTGAGGAAGGTTGCCATCATGACCTTGGAAAAACTAGGAACTTTTGTGATTGGATGACTTTTAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTGAACAACTGGACTTTGAAGATCTGCTGCAACTACCTTCAGATTTGGATCCTTTGTCCTGCCATGACATAATTTTCACCTGCTGGCAAGCACAACTGAGCAATAATGGTTCGAACCCATCTTTACTTAGAGCAATATGCTCTGCATATGGATGGCCATATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTCTTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCCAGTTTCTTCAACAAGGTTCAGAGGGTTTGGATGGATATTTACTTGCCATATCCTTGGGCCTCACATCCGTACTCAAATCCTTCTTAGATACACAATATACTTTTCATCTTGGGAAGCTGAAGCTAAAGCTACGGTCTAGTATCATGACTCTAATATATCAGAAGTGTCTATGTGTGAACTTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTCATGTCTGTGGATGCCGACCAAACTGTCAACATGTGTAATAGTTTCCATGATGTGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAACAAATGGATATCAAAATTGATTGCAAATGCAACTGAGAAAATGATGAAGCAGAAGGATGAAAGGATACAGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGCATGGGAACTTCTTTTTTCTGGTTGGCTGATGGAAACAAGATCTTCTGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGCGTATTCTTTTGGGCTACAACGCCAACTCTCTTTTCTCTTTTCACATTTGGACTCTATGCATTGATGGGAAACCAACTTGACGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTTAACACATTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCCTTTGTATCCTCCAGAAGGTTGAGCCGGTTTCTTTCTTGTCCTGAAAATAAATCTAAGGTGAAAGAAACCAATTCATGTTCCTTGCCATTCCATAGTGAACAGCCTGACTCTTTGCGAGGTTTAGCAGTCTCTTTCCAAGATGCATGTTGTACTTGGTCAAGCAGTGATGATGAAGCATTAAATTTGGTGTTGAACCATGTAAGTCTAAGCTTGCCAAGGGGTTCTTTTGTCGTGGTGATAGGAGAGGTTGGTTCAGGTAAATCATCATTGTTATATTCCATTCTTGGAGAAACACGGGTAGCTCATGGATCAATTCACTCTGATGGATCAGTGGCATATGTACCACAGGTCCCATGGATTTTATCTGGAACAATGCGTGACAACATAATATTTGGGAAAAGTTATGATCCCGAAAGGTATGCAGAAACTGTTCAAGCATGTGCTCTAGATGTTGATATCTCGTTAATGGTTGGAGGCGACATGACTTACATTGGGGAAAAGGGACTCAACTTATCTGGTGGGCAAAGAACTCGTCTTGCTTTAGCCAGGGCACTGTATCATGGATCTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGTTGGATCTTACACAATGCCATTCTAGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTCTGTACCCATAATATACAGGCAATATCCTCTGCTGAGATGGTTGTTATAATGGACAAAGGACAAATAAAGTGGGTGGGAAGTCCTAATAACCACCAAGTCTCTTCATATATAACATTCTCCCCATTGAATGAGCTTGATTCACATGTACAGAATCAAGGAAAATCTTACTGCACAAATTCTTCTTCCAAATTAAAAGAGCTCCAAGATAGAGAAATTAACCATATTGTGGAGGGAGCAGAGGAGGTCATTGAAGCTGAATTGAGGAAAGAGGGAAAAGTTGAACTTGGTGTGTATAAGAACTACGCTATGTTCACTGGTTGGTTCATTACAGTTGTAATATGCCTGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCATTTTGGGTCGATACGGCAGAAAGCAGTCAAACAAGATACTCTCTGTCCTTTTATCTGGCTATACTAGGTCTCTTTTGCATCATAAATTCTGTTCTCACATTGGTGAGGGCATTTTATTTTGCATTTGGTGGCTTACAAGCAGCAATTAAAGTGCACAACAGAATGCTTGGTAATCTTATAAATGCACCTGTGCAATTCTTTGATCAAACCCCAGGTGGAAGAATACTCAACAGGTTTTCCTCGGATCTTTATACAATTGATGACTCCCTTCCATTCATTATGAACATTCTCCTAGCTAATTTTGTTGGCCTCTTGGGCATTGCAGTAGTTTTGTCATATGTTCAGGTCTTTTTCTTAACCCTGCTATTGCCATATTGGTACATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCTAGAGAACTACGACGACTTGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACGCTTGATGGATCATCAACTATTAGGGCATTCAAATCTGAGGACTTATTTTTTGCCAATTTCATTGAACATGTAACAATGTATCAGAAGACTTCTTACACGGAGATAGCAGCCAGTTTATGGCTTTCTTTACGTCTTCAATTATTAGCTGCATTTGTCATCTCATTTATTGCGTTGATGGCTGTGGTTGGAGATCAAGGCAATCTGCCAATCAACTTTGGCACCCCTGGGCTGGTAGGATTGGCACTCTCATATGCGGCTCCGATAGTGTCCTTGTTGGGAAGCTTTCTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCGGTTGAAAGAGTCCTTGAATACATGGACATTCCTCAAGAAGAAATTGCCGGACGCCTATGCATGAACCCAGATTGGCCACATCAAGGAGTAATTGAGTTCCAAAATGTTACCTTAAAATACAAGCCATCTTTGCCACCTGCACTCTGCAATCTTAGTTTTACAATTGCTGGAGGGACACAGATTGGAATAATTGGAAGAACAGGTGCCGGAAAGTCTAGTGTGTTGAATGCCCTTTTCCGCCTTACCCCGATATGTACTGGCTCTATTTTCATTGATGGTATAAACATTAACAACATTCCTGTGAGAGACCTACGTTCTCGTTTGGCTGTTGTTCCTCAAAATCCATTCCTGTTTGAAGGACCACTAAGGGACAATCTTGATCCCTTCCAAATCCATGATGACTTGAAAATTTGGAATGCTTTGGATAAGTGTCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGCTACATGTTCTTGTAAAGGAATCTGGCATGTCATTTTCAGTTGGTCAAAGGCAGCTTCTTTGTCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAATGTACAGCCAACGTGGACACACAAACTGCTTCACTCCTTCAAAGTACCATATCTAATGAGTTCAAGGGCATAACAGTAATTACAATCGCTCACCGGATCTCAACAGTTTTGAATATGGACAGCATTTTAATCCTTGACCATGGGAACCTGGCTGAACAAGGAAACCCACAGGTTCTTCTGAAACATGACTCCTTATTCTCCAGTTTTGCTAAAGCTTCATCAATGTGA 4464 0.4003 MRTTLXVIRVWDGKGFSECFEDIYPYFLNLASVSEWIKLLYINFFSLITPTVLGFGLNAVTIVIIVLVGCIHKSSRGIQRSDSQMGLLKKLFLFVIPAVGACASLLDIIFLWKREINRHFVGYHNWFYSCSELMVWTNIIIFSRCVSSHYMLCNNVLCYWWILKPLFWIFHLLKKFPLLETSICVVESFILLLDISFGISINVIRIKMLSPKNSSFEDPLLSNDKDLEEGCHHDLGKTRNFCDWMTFKFINPVMNHGVVEQLDFEDLLQLPSDLDPLSCHDIIFTCWQAQLSNNGSNPSLLRAICSAYGWPYLRLGLLKVVNDCLGFAGPLLLNKLIQFLQQGSEGLDGYLLAISLGLTSVLKSFLDTQYTFHLGKLKLKLRSSIMTLIYQKCLCVNLAERSKFSNGEIQTFMSVDADQTVNMCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIANATEKMMKQKDERIQRTGELLTYIRTLKMHAWELLFSGWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFVSSRRLSRFLSCPENKSKVKETNSCSLPFHSEQPDSLRGLAVSFQDACCTWSSSDDEALNLVLNHVSLSLPRGSFVVVIGEVGSGKSSLLYSILGETRVAHGSIHSDGSVAYVPQVPWILSGTMRDNIIFGKSYDPERYAETVQACALDVDISLMVGGDMTYIGEKGLNLSGGQRTRLALARALYHGSDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSAEMVVIMDKGQIKWVGSPNNHQVSSYITFSPLNELDSHVQNQGKSYCTNSSSKLKELQDREINHIVEGAEEVIEAELRKEGKVELGVYKNYAMFTGWFITVVICLSAVLMQASRNGNDLWLSFWVDTAESSQTRYSLSFYLAILGLFCIINSVLTLVRAFYFAFGGLQAAIKVHNRMLGNLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVLSYVQVFFLTLLLPYWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFANFIEHVTMYQKTSYTEIAASLWLSLRLQLLAAFVISFIALMAVVGDQGNLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERVLEYMDIPQEEIAGRLCMNPDWPHQGVIEFQNVTLKYKPSLPPALCNLSFTIAGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGININNIPVRDLRSRLAVVPQNPFLFEGPLRDNLDPFQIHDDLKIWNALDKCHVKEEVEAAGGLHVLVKESGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTISNEFKGITVITIAHRISTVLNMDSILILDHGNLAEQGNPQVLLKHDSLFSSFAKASSM 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1424 1487 FunFam ABC transporter C family member 13 618 873 - -
Alju05g1424 1487 CDD ABC_6TM_MRP7_D1_like 315 600 - -
Alju05g1424 1487 CDD ABCC_MRP_domain2 1249 1468 - -
Alju05g1424 1487 Gene3D - 610 875 IPR027417 -
Alju05g1424 1487 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 930 1216 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1424 1487 Pfam ABC transporter transmembrane region 316 580 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1424 1487 Pfam ABC transporter transmembrane region 931 1176 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1424 1487 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524|GO:0016887
Alju05g1424 1487 SUPERFAMILY ABC transporter transmembrane region 301 600 IPR036640 GO:0005524|GO:0016020
Alju05g1424 1487 ProSitePatterns ABC transporters family signature. 1387 1401 IPR017871 GO:0005524|GO:0016887
Alju05g1424 1487 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 317 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju05g1424 1487 FunFam ABC transporter C family member 5 895 1234 - -
Alju05g1424 1487 Gene3D ABC transporter type 1, transmembrane domain 289 609 IPR036640 GO:0005524|GO:0016020
Alju05g1424 1487 Gene3D ABC transporter type 1, transmembrane domain 896 1234 IPR036640 GO:0005524|GO:0016020
Alju05g1424 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 848 IPR027417 -
Alju05g1424 1487 Pfam ABC transporter 1269 1415 IPR003439 GO:0005524
Alju05g1424 1487 FunFam ATP-binding cassette (ABC) transporter, putative 1238 1484 - -
Alju05g1424 1487 FunFam ATP-binding cassette subfamily C member 10 292 609 - -
Alju05g1424 1487 CDD ABC_6TM_MRP7_D2_like 929 1228 - -
Alju05g1424 1487 Gene3D - 1236 1482 IPR027417 -
Alju05g1424 1487 Pfam ABC transporter 657 789 IPR003439 GO:0005524
Alju05g1424 1487 SUPERFAMILY ABC transporter transmembrane region 926 1233 IPR036640 GO:0005524|GO:0016020
Alju05g1424 1487 SMART AAA_5 1277 1461 IPR003593 GO:0016887
Alju05g1424 1487 SMART AAA_5 666 840 IPR003593 GO:0016887
Alju05g1424 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 863 IPR003439 GO:0005524
Alju05g1424 1487 CDD ABCC_MRP_domain1 636 840 - -
Alju05g1424 1487 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 238 1484 - -
Alju05g1424 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1244 1482 IPR027417 -
Alju05g1424 1487 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1251 1484 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1424 Alju-ChrAlju05 43553758 43575165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1424 608 885 Calmodulin-binding Proteins AT2G36910 28.523 1.11e-23 107