Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1419 ATGGATTGTTCATCTTGGGTCAACACGTCCTTGGATCTCAACATTAGACCTCATCATCACATGCTTCATGAAGAAGTTCCAAAGAAGGAGGTGGAAAGCAATTTTTTCTTATCTGGGAAGAAATCTTCTGTGAAAGAAGAGTCATTTCAGACAAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTGAGTGCAGAGAACAAGAAGTTAACGGAAATGCTCACAGAGATGTGTGAGAATTACAATTCTCTGAGAAGACACTTAGCTGAATATATGAGAAACAATCCTCAAAAGGATCTTAACAACACCAACATCCCATCAAAGAAAAGGAAGTCTGATACCAGCATCAGCAACAACAACAACACTAATAGTAATCTCATGGCCATTAATGGCCCCTCTGAGAGTTGCTCAACTGATGAAGAATCATGTAAAAAATCTAAGGAAGTCACCAACAAAGCAAAAGTTTCCAAAGCTTATGTCAGGACAGAGTCATCTGATACTAGCCTGATTGTGAAGGATGGGTATCAATGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCATCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGTCCTGTAAAAAAGAAGGTGCAAAGAAGTGTAGAAGATCAATCTATTCTGGTTGCAACATATCTAGGAGAGCACAATCATCCTCATCCTTCTCAAATGGAGACATCACCGACATCAGGATCTAGCCGTTTTGTGAGCCAAGCTTCAGTTCCATGTTCATCAGCATCTCTGAGTTCTTCCTCTGTACCAGCAACAACAATTAACTTTGACCTGAAAAAATCCAATTCCAGCACCACCAACAACAACCACACGAATACCGTTGCCGTAGCCGCCGCCAAGAACCCTAAACCGAAACCTGATTCGCCGGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCCTCTTCCTTGACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCTGCCATTTCAGGAAGAATATCCCACATTAATTAA 1020 0.4225 MDCSSWVNTSLDLNIRPHHHMLHEEVPKKEVESNFFLSGKKSSVKEESFQTSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAEYMRNNPQKDLNNTNIPSKKRKSDTSISNNNNTNSNLMAINGPSESCSTDEESCKKSKEVTNKAKVSKAYVRTESSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMETSPTSGSSRFVSQASVPCSSASLSSSSVPATTINFDLKKSNSSTTNNNHTNTVAVAAAKNPKPKPDSPEVPQVLVEQMASSLTKDPNFRAALVAAISGRISHIN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1419 339 Coils Coil 52 79 - -
Alju05g1419 339 MobiDBLite consensus disorder prediction 230 246 - -
Alju05g1419 339 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g1419 339 Pfam WRKY DNA -binding domain 171 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g1419 339 MobiDBLite consensus disorder prediction 93 144 - -
Alju05g1419 339 Gene3D WRKY domain 153 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g1419 339 MobiDBLite consensus disorder prediction 225 246 - -
Alju05g1419 339 MobiDBLite consensus disorder prediction 94 136 - -
Alju05g1419 339 SUPERFAMILY WRKY DNA-binding domain 166 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju05g1419 339 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju05g1419 339 FunFam WRKY transcription factor 40 155 232 - -
Alju05g1419 339 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 335 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1419 Alju-ChrAlju05 43493078 43494658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1419 4 339 WRKY Transcription Factor Family AT1G80840 48.711 3.90e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju05g1419 WRKY 1.2e-22 CL0274