Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1411 ATGGTTACATACTACTCCGAGAAAAACTACCCGAAGTAGTTTCTGAGCTTCAAATCAATGGCTCCTCCTGACAGAGAAGTGCTTCAGACGCTTGTGGATGTTGGGGATGGCCTTCTCAATCATCCCTCTTCCATTGATCAGCTTCTCGATCTTCTTGATAAACTTGAGAATATATTATCAACTTTGGACCAAGAACCAGACGAGACCGTGAAAGAAGCAATTCTACCATCAATGAAAGCATTGATTTCCAATGAACTTTTAAGGCACTCAGACGAGCATGTTAAGATTTTCGTTACATCTTGCATGGCCGAGATTACCAGAATAACAGCACCGGATGCCCCTTATGGTGATGAACATATGAAGGAAATTTTCAAGCTCACAGTTGAAGCTTTTGAAAAGTTATCCGATGTACGCAGCCACAGTTATGACAAGGCACTTTTAATAGTTGATAATGTTGCAAGGGTCAGATCATGTCTGCTGATGATGGATCTTGAATGTGATGACTTGATCATTCAAATGTTTCAGATTTTCCTAAGAGTTATTAGGCCAAACCACCCTGAGTTTGTGACCCTTGCCATTGAAGCAATAATGACATTGGTCTTGGACGAGAGTGAAGAAATTTCCACGGATCTTCTAAGACCAATATTAGATAGCTTGACAAAGGAAAACCAGACAATTTCCCCTATCACTTGGTCATTGGCGGAGAAAGTTTTTACCAACTGTGCTGATAAGCTTCAGCACTATGTTATGAGAGCGGTGCAGTCCACAGGCAGACCTCTGGATGCTTTTGCTGAAATAGTAGTTTCACTTTGCCAGAGAGGATCTGAAACTCTTCAATGCAATCATTCAAATGGTTCTGGAAATCCATTGGTTCAGGCAGGTGAAAACGAGCCTTCCATATGCAAAAGTGCAGATGATCAATACTGTGATGACCAAGAACCAGATACTAGGCATGTTGCTCAAACTATGGATGATGCCGAGCTGAACAAAAGTAATCCCAGTTCTACCGTTGACAGTGAAATCATCAAAAAGAAAAGTGCAAAGAGGCAACCTCATTCTGATCTTACTAAGAATGAGAAAAGAAAGAATACAAAAGCCAATTTAGAAAATGGAAATTCGAAGTCAGTTGAAAAATCAAGTTCAGAAACTGATCTCGATGTCATGCCAAAGAAAAGGGATCATAAACCCAATTCTTTAATGAATCCAGAAGAAGGCTATGATCACTCTCAGATTTGTATGCATAGCAAATCTGCAAAAGCAGTTCAGCTTCAAAAGGCTGGCAACGGTGGCCATTGTTTTCTTCCCTCTGAAAATCCTGCTACCAGAAAAAATAGTTTGCAGTTAGAGTCTGAAAATATGGGTGAAGTGTCTCAACCTAAAGCAGTGAAAACCATGAAACACAAAAAGGCTCATGATAGAGATACCAGTCTTCCACCTTCTAAAAATTCTTCATCCCAAAAGGATGAGTTGCTTTTAGAGCCTAAAAATGCTGGTGAACTTTCTCAACATAAAAGCAATAAGAAATCCAGAAAAACATCTCAAGTCAGAAGGGTCTGTGATAGTGATATTGATCTTTCACCTCCAGCAAACCATGATTTGCTAAAGGATACTGTTCTGAAGAAATCTGAAAATAAAGGCAGTGAAGCTCTAGAGTCCCAATGTGAAACTGATAAGAATGTCGATGCTGCTCACCCTTCAACAAATCAGAGCACTCCCGACAGAAGCCATCGCAAAAGGGGCCGACCAAGGAAAAATAGTATCTCCAGTAATCAAGGTGCTGACCCCGGGTCTGCTAGTCTGAGGTTGGAAAAGGATCTTAAAGTAATGAAAGATGCTGGACTGAAAAATCAGGCACCTCCAAAACTCACACCAGCAATGAATATAGATACGACAAATACAGAAGAGGATCAGGGCTTAACTCAAAGAAATGATAAGAAAAGGAGGAAGCTCGATGTTCTGCCTAATAAAGATGTCAATGACTCCTGTACTATTAAGCAGCTAACTGAGTCTGTGACTAAGAAACTGACTGGAGTTGAAGAAACCCCTCAAACAAGACCAAAGAGGAAGCGAACCACTGCTTCTGAGTTGTTTGACTGCGATGAACCTTCAGTTGGTAGCAGGATCAAGGTCTGGTGGCCAATGGATAAGAGGTTTTATGAAGGTGTTGTTGATTCTTATGACTCTACCAAAGGAAAGCACAAGATTTTATATGCTGATGGTGACGTGGAAGTTTTAAACCTCAAAAAGCAACGCTGGGAGCTAATTACAGACCATGCTCCACCAGATGCAGATCAAGAAATTGATCTTCAACAGATTGAGACAGTGACATCAGATACAGAAGATAAAAGGCAAGGAAATTCAGCATCCGAGTCAGCCAAGGGAGTGAAGACAAGTAGGGGTAGAGCATCTGCTAGAACCTCCAAATCGGAATCTGCGAAATCTGCCAGAAAATCCAAGGATGATTCCATGGTTGATGAAACTGTTGTGGCTGATGAGTCTGCAGAAACTAAGAATGAGCAAGACCCATCTGGGAAGTCAGAAAACAGAATATTGAAGATTGTTTCTGATAAGATTACGAAACTAAAAGATAATTCTGCGCTTGATGAACCCATTGTGGCTGATAAATCTGCTGATCATCCACCTAGAACTAAAAGGGAGCAAGACTTAGCTGGGAATTCAAAAACCAAGAGATCAAGGAAGAGAAAGATTGAACCTAAGGATAATTCTGCACTTGATGAGCCCATTGAAGTTGTTGACTCTGCAGTTGATCCACCAATAGCTAAGAATGAGCAAGACTTAGGTGGGAAGTCTAGAACCAAAAGATCAAAAATTCTCTCTGATAAGGAAAAGATCGAACCTAAGGCTAACTCTCCACTTGATGAACCCATTGAAGCTGATGACTCTGCAGTCGACCCACCTGTAGCTAAGAATCAGCAAGACGTTGCAGGGAAGTCTAGAACTAAAAGATCAAAAACTCTCTCTGATAAGGAGAAGATCGAACCTAAGGATAACTCTGCACTTGATGAGCCCACTGAAGCTGATGACTTTGCAGTTGATCCACCTAGAACTAAAAATCAGCAAGACTCAGCTGGGAAGTCTAGAACTAGAAGATCAAATACTCTCTCTGATAAGGAAAAGATCGAAACTATGGGTAATTCTGCACTTGATGAACCCATTGAAGCTGATAACTCTGCAGTTGATCCACCTGGAGCTAAGAATGAGCAAGACTCAGCTGGGAAGTCTAGAACTAGAAGATCAAAAACTCTCTCTGATAAGGAAAAGATCGAACCTATGGGTAATTCTGCACTTGAACCCATTGAAGCTGATGACTCTGCAGTTGATCCACCTAGAACTAAGAATCAACAAGACTTAGCTGGGAAGTCTAGAACCAGAAGATCAAAGATTCTCTCCGATAAGGAAAAGATCGAACCTAGTGATAATTCTGCAATTGATGAACCCATTGAAGCTGATGACTCTGTAGTTGATCCACCTAGAACTAAGAATGAGCAGGAAACTGGGAAGTCTAAAACCAGAAGATCAAAGATTCTTCCTGATAAGAAAATGATCCAACCTAGGGATACTTCAGCACTTGATGAACCCATTGAAGCTGGTGAATTTGTAGATGATCCACCAGGAACTAAGAAAGATCAAGACTCAACTGCGAAGTCTAAAACCAGAAGATCAAAGATTCTTTCTGATAAGAAAAAGATCGAATCTAATGATAATTCTGCACTTGAGGAACCCATTGTGGCTGATGAATCAGCAGTTGATCCATCTAGAACTAATGATGAGCAAGAAACTGGGAAGTCTAAAACCAAACGATCAAAAATTCTCTCTGGTAAGAGAATGATCAAACCTAGGGATGATTCTGCACTTGATGAACCCATTGAAGCTGGTGAACCGGCAGATGATCCACCAGGAACTAAGAATAAGCAACACTCAGTTGGGAAGTCTAAAACCAGAAGATCAAAGATTGTTTCTGATGAGAAAAAGATCGAATCCAAAGATGATTCTGCACTTGATGAACCCATTGTGGCTGATGAATCAGCAGTTGATCCACCTAGAACTAATGATGAGCAAGACTTAGCTGGGAAATCTAAAACCAGAAGATCAAAGATTCTTTCTGATAAGAAAAAGATCGAATCTAAAGATGATTCTTCACTTGATGAACCCATTGTGGCTGATGAGTCAGCAGTCGATCCACCTAGAACTAATGATGAGCAAGACTTAGCTGGGAAGTCTAAAACCAGAAGATCAGAGATTCTTTCTGATAAGGAAACGGTTAAATCTAAAGATGATTCTGCACTTGAGGAACCCATTGTGGCTGATGACTCAGCAGCTGATCCACCTAAAACTAATGATGAGCAAGACTCAGATGGGAAGTCTAAAACCAAAAGGTTGACGGTAGCTTCTGAAAAGAAAAAGATCAAAGCTAAGGATGATTCTCCACTTGATGAACCCATTGAGGCTGATGAATCTGCAGTTGATCCTCATCAAAGTAATAATGAACAAGAATCAGCTGGTAAGTCTAAAACCAGAAGACTGAAGATTGTTTCTGGTATGAAGAAGATCGAACATGAGACTGATAATGTTCAGAAGTCAAAATTGCGGAAGGCTTGA 4620 0.4061 MVTYYSEKNYPKXFLSFKSMAPPDREVLQTLVDVGDGLLNHPSSIDQLLDLLDKLENILSTLDQEPDETVKEAILPSMKALISNELLRHSDEHVKIFVTSCMAEITRITAPDAPYGDEHMKEIFKLTVEAFEKLSDVRSHSYDKALLIVDNVARVRSCLLMMDLECDDLIIQMFQIFLRVIRPNHPEFVTLAIEAIMTLVLDESEEISTDLLRPILDSLTKENQTISPITWSLAEKVFTNCADKLQHYVMRAVQSTGRPLDAFAEIVVSLCQRGSETLQCNHSNGSGNPLVQAGENEPSICKSADDQYCDDQEPDTRHVAQTMDDAELNKSNPSSTVDSEIIKKKSAKRQPHSDLTKNEKRKNTKANLENGNSKSVEKSSSETDLDVMPKKRDHKPNSLMNPEEGYDHSQICMHSKSAKAVQLQKAGNGGHCFLPSENPATRKNSLQLESENMGEVSQPKAVKTMKHKKAHDRDTSLPPSKNSSSQKDELLLEPKNAGELSQHKSNKKSRKTSQVRRVCDSDIDLSPPANHDLLKDTVLKKSENKGSEALESQCETDKNVDAAHPSTNQSTPDRSHRKRGRPRKNSISSNQGADPGSASLRLEKDLKVMKDAGLKNQAPPKLTPAMNIDTTNTEEDQGLTQRNDKKRRKLDVLPNKDVNDSCTIKQLTESVTKKLTGVEETPQTRPKRKRTTASELFDCDEPSVGSRIKVWWPMDKRFYEGVVDSYDSTKGKHKILYADGDVEVLNLKKQRWELITDHAPPDADQEIDLQQIETVTSDTEDKRQGNSASESAKGVKTSRGRASARTSKSESAKSARKSKDDSMVDETVVADESAETKNEQDPSGKSENRILKIVSDKITKLKDNSALDEPIVADKSADHPPRTKREQDLAGNSKTKRSRKRKIEPKDNSALDEPIEVVDSAVDPPIAKNEQDLGGKSRTKRSKILSDKEKIEPKANSPLDEPIEADDSAVDPPVAKNQQDVAGKSRTKRSKTLSDKEKIEPKDNSALDEPTEADDFAVDPPRTKNQQDSAGKSRTRRSNTLSDKEKIETMGNSALDEPIEADNSAVDPPGAKNEQDSAGKSRTRRSKTLSDKEKIEPMGNSALEPIEADDSAVDPPRTKNQQDLAGKSRTRRSKILSDKEKIEPSDNSAIDEPIEADDSVVDPPRTKNEQETGKSKTRRSKILPDKKMIQPRDTSALDEPIEAGEFVDDPPGTKKDQDSTAKSKTRRSKILSDKKKIESNDNSALEEPIVADESAVDPSRTNDEQETGKSKTKRSKILSGKRMIKPRDDSALDEPIEAGEPADDPPGTKNKQHSVGKSKTRRSKIVSDEKKIESKDDSALDEPIVADESAVDPPRTNDEQDLAGKSKTRRSKILSDKKKIESKDDSSLDEPIVADESAVDPPRTNDEQDLAGKSKTRRSEILSDKETVKSKDDSALEEPIVADDSAADPPKTNDEQDSDGKSKTKRLTVASEKKKIKAKDDSPLDEPIEADESAVDPHQSNNEQESAGKSKTRRLKIVSGMKKIEHETDNVQKSKLRKA 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1411 1539 SMART TUDOR_7 700 759 IPR002999 -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 933 961 - -
Alju05g1411 1539 SUPERFAMILY ARM repeat 46 254 IPR016024 -
Alju05g1411 1539 Gene3D - 699 751 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1124 1148 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 325 340 - -
Alju05g1411 1539 Pfam Sister chromatid cohesion protein PDS5 protein 46 250 - -
Alju05g1411 1539 Coils Coil 45 65 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 756 1539 - -
Alju05g1411 1539 SUPERFAMILY Tudor/PWWP/MBT 704 742 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1158 1193 - -
Alju05g1411 1539 CDD Tudor_Agenet_AtEML-like 704 754 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 341 367 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1321 1342 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 304 324 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 534 558 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1257 1273 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1352 1390 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1400 1438 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1208 1242 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1507 1539 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 281 410 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1022 1036 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 982 1021 - -
Alju05g1411 1539 FunFam Binding protein 700 751 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 623 637 - -
Alju05g1411 1539 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 326 842 IPR039776 GO:0007064
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1077 1098 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 438 454 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 1448 1484 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 379 401 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 788 809 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 810 894 - -
Alju05g1411 1539 MobiDBLite consensus disorder prediction 427 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1411 Alju-ChrAlju05 43344143 43354239 Transposed