Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1395 ATGACTTCAAGAGTATTCCCTCCAAATCCAGACCACAATTTTTTCACCAAATACAAGGTCCTTTTCTTGGCTCTCACTGTCTTAGCTTCTCTAGTTATTTTCTGCTCAATACTTTACTTCCTATATCATCTATGGTACTCTGTTGTACATAGAACTAAAACGATCCCGTTTGATGCAAATTCTCCCTTGAAGCTCCAAAGGTTTTGTTACAAAGAGCTCAAGCAAGCCACCAATGGCTTTCACACTGAAAATGTCATTGGCAAAGGTGGGTCTAGCACAGTTTTTAAAGGGAAGCTTAAGGATGGGAACTTTATTGCTATTAAGCGTCTAGATGATGCTTTGTGTTCACAAAAAGAGCAAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGGTTAACGTCCCCTTTCCTTGTAACCCTTCTGGGATATTGTATGGAGAAGAACAAGAGAGCTTTGGTGTTTGAATATATGCCTAAGAGAAGCTTGCAGGAGTTTCTCTTTGGAAACGATAATGATGATGATGATGATGGATGTTTGAGTTTAAGCTGGGAGAGAAGGTTTCTTATAATATTGGATGTTGCTAGAGCTTTGGAATTCCTTCACCTTGAATGTGACCCTCCAGTGATTCATGGGGATATCAAGCCAAGCAATGTTCTGCTCGACGGAGAGCACCGTGCGAAGATTTCGGATTTCGGATTGTCAAGGATTAAAGTGGAGGAGGGTGAGTTTGGTGGGAATATGTTTAGTCAGGACTTGGGTGATAAGAGTCAGGATCTATGGAAGAGCCAAGAGTTTTCAGGTAATTTAACTGCTGATAGTTCTGCTGAGCACATTAATGAAGTAGATTTTTCTCTAGCTTTGCAGGCATCTTCTTCATCCAAGTATAGTAGTAGAGTAGGTTTTAATGTTGGAGTTTTGAACTTGAATTCTTTGAATTATAATGCCTGCATAGGTGAAAATGAAGTAAAAACTAGTGTCAAGGGGAAGGAAATCTCAAGTTTGGGTCATATTGGTGGGGATGATTGGAATTGGAAGAACAAGTTTGTTCCTTGTAATGATGATTTTTCCAGCATTATTGATCATAGTAAAGAGGTAAATGTTAATGCTTCCTCAGTCGATGAAGAAAAGCCAAATGAAAAACCATGGGAAAAAGATTGGTGGTGGAAGCAGGAAGAAAGTGAAGAATCATGTAGTAAAGATTATGTCATGGAGTGGATAGGGAGTCAGATTCATCCATCAAACACAGATTGGGATGATGAAGAAAAGAACATTCCAGAGGAAACAGAACTGGAAAATTCAACTCCAACAGATAAACCAGATGAGAACAAACAATCAGTGGGAAAGAGATGTCATGAAAAGCATAAGAAGATGCAAGAGTTGTGGGAAGAAGAAGAGAATCTTGCAGAATCAAGCAAGAAGAGTGGCAACCAAAAAAATCTTCATGCTAAGTGGAAGTTTTATCTCTGCAGATGTAAAAACTTCCAAAGGGAGGATCAGAATCAGAATGATTATGATAATCTAAATGGAGAGTTTAGTTTCAGAAGAGGTTGGAGGAAGAAGAAGAAGAAAGAAAATAATAGTCCTTCCATTATTGGCCGCGAGATGAGAAGCGGAGATCTTCTCAGCAGCACAACAACAAGCATGAGAGGAACACTGAGTTATGCTGCTCCAGAACATGGTGGTTGTGAAGTGTTCTTAATGGAGAAAACTGATATTTACAGTTTTGGAGTATTGATACTTGTGGTTGTTTCAGGAAGAAGACCATTGTTACATATTCTTGAATCATCCCCATTATTGAAGCTTGAGAAGGCTAATTTAGTGAGCTGGTGTAGGCAATTGGCAAAATCTGGTAATATTCTAGAACTTGCGGATGAGAGGCTGAGAGAGGATTATAACAAGGAGCAAGCAAGCTTGTGCATAAACTTGGCACTTTCTTGCTTACAGAAAAATCCCGAATTAAGGCCACATATTGGGGATATTGTCAAGATTCTGAATGGGGATACGGATCTACCACCAGCATTTTCATTTGAGTTCTCTCCTTCTCCACCTTTTAGACTGTACAGCAGCAAATCATGA 2076 0.3935 MTSRVFPPNPDHNFFTKYKVLFLALTVLASLVIFCSILYFLYHLWYSVVHRTKTIPFDANSPLKLQRFCYKELKQATNGFHTENVIGKGGSSTVFKGKLKDGNFIAIKRLDDALCSQKEQEFQNELQILGGLTSPFLVTLLGYCMEKNKRALVFEYMPKRSLQEFLFGNDNDDDDDGCLSLSWERRFLIILDVARALEFLHLECDPPVIHGDIKPSNVLLDGEHRAKISDFGLSRIKVEEGEFGGNMFSQDLGDKSQDLWKSQEFSGNLTADSSAEHINEVDFSLALQASSSSKYSSRVGFNVGVLNLNSLNYNACIGENEVKTSVKGKEISSLGHIGGDDWNWKNKFVPCNDDFSSIIDHSKEVNVNASSVDEEKPNEKPWEKDWWWKQEESEESCSKDYVMEWIGSQIHPSNTDWDDEEKNIPEETELENSTPTDKPDENKQSVGKRCHEKHKKMQELWEEEENLAESSKKSGNQKNLHAKWKFYLCRCKNFQREDQNQNDYDNLNGEFSFRRGWRKKKKKENNSPSIIGREMRSGDLLSSTTTSMRGTLSYAAPEHGGCEVFLMEKTDIYSFGVLILVVVSGRRPLLHILESSPLLKLEKANLVSWCRQLAKSGNILELADERLREDYNKEQASLCINLALSCLQKNPELRPHIGDIVKILNGDTDLPPAFSFEFSPSPPFRLYSSKS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1395 691 Gene3D Transferase(Phosphotransferase) domain 1 523 670 - -
Alju05g1395 691 Gene3D Transferase(Phosphotransferase) domain 1 157 268 - -
Alju05g1395 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Alju05g1395 691 Gene3D Phosphorylase Kinase; domain 1 55 156 - -
Alju05g1395 691 MobiDBLite consensus disorder prediction 427 456 - -
Alju05g1395 691 SMART serkin_6 80 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1395 691 SUPERFAMILY Protein kinase-like (PK-like) 59 672 IPR011009 -
Alju05g1395 691 ProSiteProfiles Protein kinase domain profile. 80 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1395 691 FunFam Receptor-like serine/threonine-protein kinase At4g25390 49 156 - -
Alju05g1395 691 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Alju05g1395 691 Pfam Protein kinase domain 80 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1395 691 Pfam Protein kinase domain 543 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1395 691 PANTHER OS07G0586332 PROTEIN 14 687 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1395 Alju-ChrAlju05 43175197 43177272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1395 524 664 Receptor kinase-like Gene Family AT3G58690 26.036 2.57e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Alju05g1395 Pkinase 1e-28 CL0016