Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1390 ATGGACTTCTTTTGGGACAAAGATGGGGCACGTGCAGGGCGCGTGGGAGCCGCTGGTTTTAACACAAAACTACTTTTTTCCTACATCATCAGAGGCAGAGCAACGGAAACTGTTTGGGATCATTCATTCTGTTTCCTCTTTTCACCTCGAGAGTTAAAGATGGGAATATATCTCAGCGCCCCGAAAACAGAGAAGGCTTCCGATGATGGTGAGAATGACAGGCTTCGCTACGGTTTGTCTTCCATGCAGGGATGGCGTGCTACCATGGAAGATGCTCATGCAGCCAACCTAAATTTGGACGAGTCAACATCTTTCTTTGGCGTTTATGATGGTCACGGAGGTAAAGCTGTTGCTAAATTTTGTGCCAAATATCTGCACCGACAGGTGCTTAAGAATGAAGCTTATGTAGCTGGAGATGTAGGCACATCTTTGCAGAAAACATTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCTTGGGAGATAATATAGAAAAATTGTCTGGTATGCTGGAGGGCTTTATTTGGTCTCCTAGGGGTGGTGAAGGCAATGACAATTCTGATGATTGGGTTCTTGAGGAGGGACCGCATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAACCAACTTGTAGTTGCAAATGCTGGTGATTCTCGCTGTGTCATATCTAGGAAGGGACAGGCACATAATTTATCTAAAGACCACAAGCCTGACCTTGATGTTGAGAGAGAAAGGATTTTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAACTTAGCGAGAGCAATCGGAGACATGGAATTTAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTGACCGCTGATCCAGATATAACTTCTGTTGAGCTTTGCAATGATGATGAGTTTCTTGTAATAGCGTGTGACGGGATATGGGATTGCATGTCAAGCCAACAGCTTGTGGATTTTGTACACTCTCAGCTGAAGACAGAGAATAAACTATCTGCGGTTTGCGAGAAAGTATTTGATTGGTGTTTATCACCTACGGCTGGCGGTGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCATTCGACTCCAGATGATTCAATTTCAGACAGGTCTCCATCATCTGGTCAACCATCCGAGGCTGATGAGAGTTCAAATCAAGAATCCAACGGGGAAAGAAGTTTAGACCAACCAGTTTAA 1269 0.4444 MDFFWDKDGARAGRVGAAGFNTKLLFSYIIRGRATETVWDHSFCFLFSPRELKMGIYLSAPKTEKASDDGENDRLRYGLSSMQGWRATMEDAHAANLNLDESTSFFGVYDGHGGKAVAKFCAKYLHRQVLKNEAYVAGDVGTSLQKTFLRMDEMMRGQRGWRELAVLGDNIEKLSGMLEGFIWSPRGGEGNDNSDDWVLEEGPHSDFTGPNSGCTACVAVIRGNQLVVANAGDSRCVISRKGQAHNLSKDHKPDLDVERERILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCNDDEFLVIACDGIWDCMSSQQLVDFVHSQLKTENKLSAVCEKVFDWCLSPTAGGEGCDNMTMILVQFKRHSTPDDSISDRSPSSGQPSEADESSNQESNGERSLDQPV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1390 422 MobiDBLite consensus disorder prediction 391 422 - -
Alju05g1390 422 PANTHER PROTEIN PHOSPHATASE 2C 67 380 IPR015655 GO:0004722|GO:0006470
Alju05g1390 422 Gene3D - 53 382 IPR036457 -
Alju05g1390 422 MobiDBLite consensus disorder prediction 385 422 - -
Alju05g1390 422 Pfam Protein phosphatase 2C 208 366 IPR001932 -
Alju05g1390 422 Pfam Protein phosphatase 2C 76 156 IPR001932 -
Alju05g1390 422 CDD PP2Cc 76 381 IPR001932 -
Alju05g1390 422 ProSiteProfiles PPM-type phosphatase domain profile. 76 381 IPR001932 -
Alju05g1390 422 ProSitePatterns PPM-type phosphatase domain signature. 105 113 IPR000222 GO:0043169
Alju05g1390 422 SUPERFAMILY PP2C-like 56 382 IPR036457 -
Alju05g1390 422 SMART PP2C_4 66 379 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1390 Alju-ChrAlju05 43098134 43106324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1390 54 390 PP2C-type Phosphatase Gene Family AT2G25070 76.023 0.0 559