Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1389 ATGTCGGATCTCCTCCTCAAAGCAATTGAGCAATCACGAATTTCTTTGGTCGTCTTCTCCCAAAACTATGCTTCTTCTCGTTGGTGCTTGGATGAGCTAGCAAAGATACGTGAGGGAATTAACCAACCGGGACACTCTGTTGTACCAATTTTCTTGGATGTCGATCCATCTGATGTTCGAAGACAGAGGGGGAAATATAAAGAATTCTTTGATAAATACGAAAGAAACTTCGGTGATGATATAGACAAGGTGCAAAGATGGAGGATAGCACTGACTCACGTAGCCAGTCTCGCTGGTTATGATGTACGGGCTAAATCAGAGTCAGATGTTATTGATGAAATTGTTGATGATGCAATACGCAAGTTGGGTCATAGATTCTCAAGTCTGGCTGATGATCTAGTGGGCATGCAATCTCGTGTAGAAGCATTGGAAAGCCTTTTAGATTTACAATCAGAACATGTTCGAACGGTAGGGATATGGGGGATGTCTGGTGTAGGTAAAACTACCCTAGCGGCGGCTGTATTCGATAAAATTTCTCACCATTTTGAAGCTGTTAGTTTTCTTGATAATATACGCGAAGTTCTTGAGGGTCCCAGACTTGTACGTCTACAAAAACAACTCCTCCATGAAATACTGCAGGAAGATATAGAGATATGGGACGATCACAGGGGAACCAATTTGATAAGCACTAGGCTTCAGCGCCGTAAAATTCTTCTTGTTCTTGATGATGTTCATGATTATGGTCAACTGGAGAAACTGGTTGCAAATTCCGCATGGTTTGGTCCTGGAAGTAGAGTCATCATAACAACTAGGAATTTGCATATCCTAACCAGTCATAGAGTGGATGACGTTTATGAGGTTAAACTACTGAATGATGATGAAGCTCTTCAACTTTTCTGCAGAAAAGCCTTCAAACAAGATCATCCCTTGAGCGACTTTAAAGTGCTGACTCATTGTCTGCTACAATATGCTAAAGCCCTTCCACTGCTAATCAGAGTTTTAGGTTCCTTTATGTATGGGCTAGAGATATCCGAGTGGATTGCTCAGTTAGAAAGATTGAAAGAAATTCCCGGCCAAGATGTTATGGGAATTCTTGAAACAAGTTTTTCTCGGCTTGAGGAAAAGGACAAGGACATATTTCTAGACATTGCTTGTTTCTTTAGGGGAGCAGATGAGAACTATGTCACAAAAATTTTAGAACATTGTGGATTCAATCCTAAAATTGGAATTAGAGTTCTCCATGACAGATCACTCCTGAACATTGTCAATGGGAGGTTGTGGATGCATGATTTACTGCAAGAAATGGGATGTAAGATTGCAAAGGGAGAATTTCCTAATGAGCCAGCGAAGTGGAGTAGGTTGTGGTCATACAAGGATATTCAAACTGTAGAGACAGGAACGGAGAAAGTTGAAGCCATCGTCCTGAGCCCGGAAGACCTGCAGGAGACGCCATTGAAGGCTGAAGCTTTATCACAAATGAGCCGCCTCAGACTAATCATATTCCCTAATAATGTGAAATTTTCTGGAAACCTCAATAGCCTGTCCAATGAGTTACGGCTTCTTTCATGGAATAAATTTCCTTTCAGCTCTCTGCCATCAAGTTTTGAATCAGACAAACTTGTTGAGCTGATCATGCATGACAGCAACATAATAGAACTTTGGAAAGGCGTAAAGAGATTGCCAAGTTTGAGAAGCATTGATCTACGTGGCTCCAAAAGTCTAATCAATACCCCAAATGTTAAGGGAGTTGCAAACCTTGAGCGGTTGGATCTTGAAGGATGTACTGGATTACTGCAGGTCGATCCGTCTGTTGGAGATCTTAAAAGGATCAAGTTATTGAATTTGAGAAACTGTAATAATCTAACCAGTTTCCCAAACACCTTATTCCTGTCAGCTTCTCTTGAAGTTCTGAACCTTTCTGGCTGTTCCAGACTTGCAAAATCGTTGAACTCCAAGGGACCTTGA 1965 0.4132 MSDLLLKAIEQSRISLVVFSQNYASSRWCLDELAKIREGINQPGHSVVPIFLDVDPSDVRRQRGKYKEFFDKYERNFGDDIDKVQRWRIALTHVASLAGYDVRAKSESDVIDEIVDDAIRKLGHRFSSLADDLVGMQSRVEALESLLDLQSEHVRTVGIWGMSGVGKTTLAAAVFDKISHHFEAVSFLDNIREVLEGPRLVRLQKQLLHEILQEDIEIWDDHRGTNLISTRLQRRKILLVLDDVHDYGQLEKLVANSAWFGPGSRVIITTRNLHILTSHRVDDVYEVKLLNDDEALQLFCRKAFKQDHPLSDFKVLTHCLLQYAKALPLLIRVLGSFMYGLEISEWIAQLERLKEIPGQDVMGILETSFSRLEEKDKDIFLDIACFFRGADENYVTKILEHCGFNPKIGIRVLHDRSLLNIVNGRLWMHDLLQEMGCKIAKGEFPNEPAKWSRLWSYKDIQTVETGTEKVEAIVLSPEDLQETPLKAEALSQMSRLRLIIFPNNVKFSGNLNSLSNELRLLSWNKFPFSSLPSSFESDKLVELIMHDSNIIELWKGVKRLPSLRSIDLRGSKSLINTPNVKGVANLERLDLEGCTGLLQVDPSVGDLKRIKLLNLRNCNNLTSFPNTLFLSASLEVLNLSGCSRLAKSLNSKGP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1389 654 Pfam TIR domain 2 132 IPR000157 GO:0007165
Alju05g1389 654 Gene3D - 289 373 IPR042197 -
Alju05g1389 654 ProSiteProfiles TIR domain profile. 1 122 IPR000157 GO:0007165
Alju05g1389 654 Gene3D - 1 126 IPR035897 -
Alju05g1389 654 Gene3D Ribonuclease Inhibitor 454 652 IPR032675 -
Alju05g1389 654 PRINTS Disease resistance protein signature 324 338 - -
Alju05g1389 654 PRINTS Disease resistance protein signature 156 171 - -
Alju05g1389 654 PRINTS Disease resistance protein signature 605 621 - -
Alju05g1389 654 PRINTS Disease resistance protein signature 231 245 - -
Alju05g1389 654 SUPERFAMILY L domain-like 427 643 - -
Alju05g1389 654 Gene3D - 127 284 IPR027417 -
Alju05g1389 654 Pfam NB-ARC domain 139 353 IPR002182 GO:0043531
Alju05g1389 654 Pfam Leucine Rich Repeat 539 558 IPR011713 -
Alju05g1389 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 383 IPR027417 -
Alju05g1389 654 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 649 IPR044974 GO:0006952
Alju05g1389 654 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 100 IPR035897 -
Alju05g1389 654 SMART till_3 1 97 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1389 Alju-ChrAlju05 43088694 43091095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1389 8 646 WRKY Transcription Factor Family AT4G12020 34.191 9.90e-97 324