Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1360 ATGAAGAAGAAGCTTCCAGTTGTGGAGGTGGAGAAGAAGAAGTATCCGATTGGTCCTGAGCATTATGAACTCTACGAGGAAATTGGGCAAGGCGTGAGTGCCACGGTTCACCGTGCTCTTTGTAAACCGTTCAATGAGACTGTTGCCATCAAAATTCTTGATTTCGAACGCGACAATGCTGATTTGAATAACATTTTTCGTGAAGCATACACAATGAACCTAATTGACCACCCTAATGTCCTTAAATCACACTGCTCATTCGTTAGTGATCATAATCTGTGGTTTGTCATGCCATATATGGCTGGTGGTTCCTGCCTTCACATCTTAAAAGCTGCTTACCCTGATGGTTTTGAGGAGGTTGTAATAGCCACAATATTGCGAGAGGTATTAAAGGGTTTAGAATATCTTCATCAGCAAGGGCATATACATCGAGATGTTAAAGCAGGGAACATTCTAATTGATGGCCATGGGGCAATCAAGCTTGGAGATTTTGGCGTATCTGCTTGTCTTTTCGATTCTGGTGACCGACAACGCACACGGAATACGTTTGTTGGGACACCCTGCTGGATGGCACCTGAGGTCATGGAGCAACTGCGTGGCTATGACTTCAAGGCTGATATCTGGTCATTTGGCATAACAGCATTAGAACTTGCCCATGGTCATGCTCCTTTCTCAAAGTATCCACCAATGAAGGTACTGTTGATGACATTGCAAAGTGCGCCTCCTGGCCTCGATTACGAAAGGGATAAAAAGTTCTCTCTGTCATTTAAACAGATGATCTATGACTGTTTAAAGAAAGATCCTTCAAAACGACCAACTGCCAAAAAGTTGTTGAAGCATTCATTCTTTAAGCAGGCTCGCTCAAATGATTATATTTCACGAAAGCTTTTGGAGGGGCTACCTCCTTTAGGTGATCGCATTAAAGCCCTAAAGATAAAAGAACAAGACATGCTTGCTCAAGAGAAAATGCCTCATGGGCGAATGGAAGAAATATCTCAGAATGAATACAAGCGAGGAATTAGTAGCTGGAACTTCAATCTTGATGATTTGAAGGCTCAGGCTTCCTTGGATTCCGACCCTATAGATGATAACATAAGATGTTCAAACTCCTTTTCTACAATAGATGAACATGACAAGCCATCATCAAGTCAAAACCAAATTCCATCTCAAGTTGCAGATATGGACAACACCGATGAGATGCAAAATAAATCAACTTCTGTCCCCATAGTTGGCTCCAAGTTAAAATATGAAGATCGTGATTCTAGCATCACCAGCTCAAGCCATAGGCAGGACATTTCACAAGACTCTCCATCGCTTCTCGATAATCAGGTTGACATGGATGAAAAATCTAGTAGGGAGAGTAGCGGGAGGCCTGTAGAGGGCACAGCTATTCATTCCCATCATGGTAGATTTTCAGTGTGTGTCTCCCACGAAGTTACCCCTCCATCTACCCCGGTAGAAAGGGAGAAGCTGCAACATCAGCCCCAGCACAACTTAAATTGCAATGCAACTACAGTTCCCCTAACGAGGGATGATGAGCTTTCTGAACTTTCTTCTAAAGCTTCAAAATTGTCAGCTAGTTCCGATGATAATGGCGAAAAAGCAAAGGTACCCGTTGTTCAGCAGAAAGGACGGTTTAAGGTTACAGCTGAAAATGTTGACTTAGACAAGGTGGGCCCATCGTCTCCTGTACTTCATAAGGATCAGCCATGA 1713 0.4308 MKKKLPVVEVEKKKYPIGPEHYELYEEIGQGVSATVHRALCKPFNETVAIKILDFERDNADLNNIFREAYTMNLIDHPNVLKSHCSFVSDHNLWFVMPYMAGGSCLHILKAAYPDGFEEVVIATILREVLKGLEYLHQQGHIHRDVKAGNILIDGHGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLRGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQSAPPGLDYERDKKFSLSFKQMIYDCLKKDPSKRPTAKKLLKHSFFKQARSNDYISRKLLEGLPPLGDRIKALKIKEQDMLAQEKMPHGRMEEISQNEYKRGISSWNFNLDDLKAQASLDSDPIDDNIRCSNSFSTIDEHDKPSSSQNQIPSQVADMDNTDEMQNKSTSVPIVGSKLKYEDRDSSITSSSHRQDISQDSPSLLDNQVDMDEKSSRESSGRPVEGTAIHSHHGRFSVCVSHEVTPPSTPVEREKLQHQPQHNLNCNATTVPLTRDDELSELSSKASKLSASSDDNGEKAKVPVVQQKGRFKVTAENVDLDKVGPSSPVLHKDQP 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1360 570 MobiDBLite consensus disorder prediction 401 541 - -
Alju05g1360 570 MobiDBLite consensus disorder prediction 362 389 - -
Alju05g1360 570 Pfam Protein kinase domain 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1360 570 MobiDBLite consensus disorder prediction 426 444 - -
Alju05g1360 570 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1360 570 MobiDBLite consensus disorder prediction 357 389 - -
Alju05g1360 570 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 561 IPR047173 GO:0043539
Alju05g1360 570 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 336 - -
Alju05g1360 570 SUPERFAMILY Protein kinase-like (PK-like) 20 325 IPR011009 -
Alju05g1360 570 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Alju05g1360 570 Gene3D Transferase(Phosphotransferase) domain 1 103 336 - -
Alju05g1360 570 MobiDBLite consensus disorder prediction 495 512 - -
Alju05g1360 570 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Alju05g1360 570 MobiDBLite consensus disorder prediction 551 570 - -
Alju05g1360 570 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1360 570 CDD STKc_OSR1_SPAK 20 283 - -
Alju05g1360 570 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1360 Alju-ChrAlju05 42615404 42620038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1360 10 567 MAP Kinase Kinase Kinase Kinase AT1G79640 63.636 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Alju05g1360 Pkinase 3.8e-61 CL0016