Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1347 ATGGAGTCATTATCATCAATGTCGTCCACTGTTTTAGTTCTCATCTTCTTCCTCCTTTCAACTTCATTATCTCTGTATTTTCATGGCGGCGAGGCAGCTGTGGTTATTGTGTCCAAGGATGGGGATGGAGATTATGGAAGTGTGAGTGAAGCCATAGCCAAAGCTCCTGAGTTCAGTGACAAGCCCTTCACCATTCAAGTTCGAAGTGGCACTTATAATGAGTACGTCGTGGTTCCGCCGGAAAAAACCAATATCAAGCTCGTCGGCGAAGGACCAAGTCAGACCAGAATAGTTGGCTCCCACCATGGCACCACCCTAGATGTCCGTGGAGATGGGTTCGTCGCAGAGAACATAGGGCTGGTGAACTCCGCCGGGTTAAAAGCAAGCGCCGCCGTGACGGTTCGCAACGAAGCCGAAAAGAGCATTTTCTTTCAATGCTCCATTGAAGGCTTCCAAGACACACTTTGGGCCGTTACCGGTCGCCAGTTCTACAAGAATTGTGATATCTATGGCACCGTTGACTTCATCTACGGCAATGCTGCCGCCCTCTTTCAGGATTGCAACCTCTATGCTCGCTATCGGCCTTATGTCACCTTCACCGCCCAGTCACGTGACAGCCCAGACGAGCACACCGCCTTCGCCTTCCAACACTGCCACTTCACAATGGCCCCAGAGGATGCTGCTATGAAGTCGAAGGTCCGAGCAACATTGGGAAGGCCGTGGCGGCCGTATTCAACGGTGGCCGTAATTGACTCATTCATTGACTCTATGGTTGACCCCAAGGGATGGGAAGAGATGCAAGGTCAGCCTACCGATAAGGTGACATATGTGGAGTTTAATAATTATGGGCCTGGGTCCAATACATCTGGGAGAGTGAACTGGGCCGGTGTTAGAGTCCTTAATGACCCAAATGAGGCCCAACCTTTCACAGCTGCTGCTCTGTTAGATGCTGACTCTTGGATTCCCCACAAGGGGGTTCCTTATAATTGA 990 0.5071 MESLSSMSSTVLVLIFFLLSTSLSLYFHGGEAAVVIVSKDGDGDYGSVSEAIAKAPEFSDKPFTIQVRSGTYNEYVVVPPEKTNIKLVGEGPSQTRIVGSHHGTTLDVRGDGFVAENIGLVNSAGLKASAAVTVRNEAEKSIFFQCSIEGFQDTLWAVTGRQFYKNCDIYGTVDFIYGNAAALFQDCNLYARYRPYVTFTAQSRDSPDEHTAFAFQHCHFTMAPEDAAMKSKVRATLGRPWRPYSTVAVIDSFIDSMVDPKGWEEMQGQPTDKVTYVEFNNYGPGSNTSGRVNWAGVRVLNDPNEAQPFTAAALLDADSWIPHKGVPYN 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1347 329 SUPERFAMILY Pectin lyase-like 32 328 IPR011050 -
Alju05g1347 329 PANTHER PECTINESTERASE 33 322 - -
Alju05g1347 329 Gene3D - 31 329 IPR012334 -
Alju05g1347 329 FunFam Pectinesterase 4 31 329 - -
Alju05g1347 329 ProSiteProfiles Phosphotyrosine interaction domain (PID) profile. 197 238 IPR006020 -
Alju05g1347 329 Pfam Pectinesterase 35 317 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju05g1347 Alju-ChrAlju05 42397284 42400808 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1347 30 328 Carbohydrate Esterase AT4G00190 40.566 3.99e-77 242