Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1346 ATGTCTAAGACATCTCCTCTGCATCCCCGTTCTGCCCCAACACAATTCTCTTATTCCCCACTGAGACTGAGACACACCATCCTCATCCCCAAACACATACTCTCTCTCTCCTCCTCTGTTTCTCTCTCTCTCTCTCTCCTACGTTTCCTCTCATCACCTCATCTTCCTTCAGCTCCTCCAATGGCCACCACAGAGACCGCCGTCAATCCCCGAACCGAGTTCATCTTCAGGTCCAAACTTCCCGACATCTACATCCCCAAACACCTCCCTCTTCATTCTTACTGCTTCGAGAATCTCGCCGAATTCGGGTCCCGCCCATGCCTGATCAATGCCCCCACCGGCGATATCTACACTTACTACGACGTCGAGCTCACCGCCCGGCGAGTCGCCTCCGGATTGAACAAATTCGGCGTTGGACAGGGTGACGTCATCATGGTCCTCCTCCCTAATTCCCCTGAATTCGTCTTCTCCTTCCTCGGCGCCTCCATCCGCGGCGCCATGACAACCGCCGCAAATCCCTTCTTCACCGCCGCCGAGGTCGCCAAACAAGCCAAAGCCTCCAACGCGAAGCTCATCGTAACCCAATCATCCTTCTTCGAGAAAGTGAAGGACCTCGACGTGAAGCTAATCTTCGTGGATTCTCCTCCAGACGGACATTCACATTTCTCAGAGCTATCTCAGGCCGATGAAAACGATATTCCCGAGGTGGAGATCAAACCGGACGACGCCATCGCATTGCCGTATTCCTCCGGCACCACCGGGTTACCAAAAGGTGTGATGCTAACACACAAGGGATTAGTGACGAGCATAGCACAACAAGTCGACGGAGAGAATCCAAATCTGTATTTTCACCATGAAGATGTGATTCTCTGTGTGCTTCCCCTGTTTCATATATACTCTTTGAACTCTGTTTTGCTGTGTGGATTGAGAGCCAAGGCGGCGATCATGTTGATGCCCAAGTTCGAGATCAATACGTTGCTGGGGTTGATACAGAAATACAAGGTGTCGATCGCGCCGGTGGTGCCGCCGATCGTGCTGGCCATCTCGAAGTCGCCGGATATCGATAAGTATGACCTGTCGTCGATCAGAGTATTGAAGTCCGGTGGGGCTCCTCTGGGTAGAGAACTTGAGGACTCTGTTAGAGCCAAGTTCCCAAAGGCCAGACTCGGTCAGGGATATGGGATGACTGAGGCAGGACCAGTGTTGACGATGAGCTTAGCATTTGCAAAGGAGCCTATGGAAGTGAAGGCAGGAGCCTGTGGAACAGTAGTTAGAAATGCTGAAATGAAGATTGTGGACCCTGAGACCTTTGAGTCTCTGCCTCGCAACCAGCCGGGTGAGATCTGTATTAGGGGCGATCAAATCATGAAAGGGTATCTGAATGATCTAGAGGCAACGAAGCGAACTATAGACGAGGAGGGGTGGTTGCATACGGGAGACATAGGTTTCATCGATGAGGACGATGAGCTGTTCATCGTTGATAGGCTGAAGGAGCTGATCAAATACAAAGGCTTCCAGGTGGCCCCCGCTGAACTCGAGGCCCTACTTCTTTCTCATCCTCACATATCCGACGCCGCCGTGGTCCCAATGAAGGATGAAGCAGCAGGAGAGGTGCCCGTTGCTTTTGTGGTCAGATCCAACGGTCACACTCAAACCACCGAGGATGACATCAAACAGTTTGTCTCCAAACAGGTGGTGTTTTACAAGAGAATAAGCAGAGTGTTCTTCATTGATGCAATTCCAAAGTCACCATCAGGCAAGATCTTAAGAAAGGATCTCAGAGCAAAAATAGCTGCCGCCGCGAGTAAGTGA 1812 0.5143 MSKTSPLHPRSAPTQFSYSPLRLRHTILIPKHILSLSSSVSLSLSLLRFLSSPHLPSAPPMATTETAVNPRTEFIFRSKLPDIYIPKHLPLHSYCFENLAEFGSRPCLINAPTGDIYTYYDVELTARRVASGLNKFGVGQGDVIMVLLPNSPEFVFSFLGASIRGAMTTAANPFFTAAEVAKQAKASNAKLIVTQSSFFEKVKDLDVKLIFVDSPPDGHSHFSELSQADENDIPEVEIKPDDAIALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYFHHEDVILCVLPLFHIYSLNSVLLCGLRAKAAIMLMPKFEINTLLGLIQKYKVSIAPVVPPIVLAISKSPDIDKYDLSSIRVLKSGGAPLGRELEDSVRAKFPKARLGQGYGMTEAGPVLTMSLAFAKEPMEVKAGACGTVVRNAEMKIVDPETFESLPRNQPGEICIRGDQIMKGYLNDLEATKRTIDEEGWLHTGDIGFIDEDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPHISDAAVVPMKDEAAGEVPVAFVVRSNGHTQTTEDDIKQFVSKQVVFYKRISRVFFIDAIPKSPSGKILRKDLRAKIAAAASK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1346 603 Pfam AMP-binding enzyme 98 502 IPR000873 -
Alju05g1346 603 Gene3D - 497 601 IPR045851 -
Alju05g1346 603 ProSitePatterns Putative AMP-binding domain signature. 246 257 IPR020845 -
Alju05g1346 603 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 73 596 - -
Alju05g1346 603 FunFam Long-chain-fatty-acid--CoA ligase FadD 77 497 - -
Alju05g1346 603 CDD 4CL 85 593 - -
Alju05g1346 603 FunFam 4-coumarate--CoA ligase 2 498 600 - -
Alju05g1346 603 SUPERFAMILY Acetyl-CoA synthetase-like 68 599 - -
Alju05g1346 603 Gene3D - 69 496 IPR042099 -
Alju05g1346 603 Pfam AMP-binding enzyme C-terminal domain 511 587 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1346 Alju-ChrAlju05 42376939 42381561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1346 69 565 Monolignol Biosynthesis Gene Families AT1G51680 69.941 0.0 718