Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1344 ATGATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCGTCACCATCTGCAAGAAAAGTCCAAACTTTTGATTTTGAGACAGCACATGTACTTTCTCCTGTAAATTTGGCCAGCCCATCCTTCTTTAAGCGAGCACAGATCCGACCTTTCAGGAGCATATATATTGTCTTAATTAAAGCAAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCGATATTGTTACATTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCTTTGGCAGAACGTTTGGGATATGCTACGGAGCAGCTTGCATTTTATACTGGACCAACAGTTGGAGGACTGCTGAATGCCACATTTGGCAATGCTACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTATTGGGCTCAATTTTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGGATTGTTCACCACAATAAGATTCAGCTTTTCAACAAGGCATCTGCTGTTGTAAATTCAGGGTTGCTCTTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCACTCTGAGGTTCATTTTGGAAAATCAGAGTTATCACTATCCAGATTTAGTAGCTGTATAATGCTGGTGGCTTATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATAACCCTATTGAACAGGAGGATGGTAATAGTGAAAATGATGATGAGGAAGAAGTTGAATTAACTCAATGGGAAGCAATAGCCTGGCTCGCTACTTTGACAATATGGGTATCTGTATTATCTGGGTACCTTGTGGATGCCATAGAGGGGGCATCTGAGTCATTGCATATGCCTGTGGCTTTTATAAGTGTCATATTGCTTCCAATTGTGGGCAATGCTGCTGAACATGCAAGTGCCATAATGTTTGCCATGAAGGATAAGCTTGATATCACACTTGGAGTTGCTATTGGATCTTCTACCCAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTATTGGGTGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTCGAGACCGCCTCGCTCTTTATCACAGTGCTAGTAGTTGCATTTATGTTGCAGGAAGGGACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGAAGGTGATGACTAA 1299 0.4018 MMGSAEDKIDLDSDEEIAFRPSPSARKVQTFDFETAHVLSPVNLASPSFFKRAQIRPFRSIYIVLIKAKINMLLPFGPLAILLHYLTQKHGWVFFFSLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHNKIQLFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYNPIEQEDGNSENDDEEEVELTQWEAIAWLATLTIWVSVLSGYLVDAIEGASESLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVIGWCMGKEMDLNFQLFETASLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTEGDD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1344 432 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 37 427 IPR004713 GO:0006812|GO:0008324|GO:0016020
Alju05g1344 432 Gene3D - 121 264 IPR044880 -
Alju05g1344 432 Gene3D - 268 423 IPR044880 -
Alju05g1344 432 FunFam Vacuolar cation/proton exchanger 267 423 - -
Alju05g1344 432 NCBIfam calcium/proton exchanger 64 422 - -
Alju05g1344 432 Pfam Sodium/calcium exchanger protein 92 247 IPR004837 GO:0016020|GO:0055085
Alju05g1344 432 Pfam Sodium/calcium exchanger protein 280 419 IPR004837 GO:0016020|GO:0055085
Alju05g1344 432 NCBIfam calcium/proton exchanger 73 422 IPR004798 GO:0006816|GO:0015369
Alju05g1344 432 FunFam Vacuolar cation/proton exchanger 121 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1344 Alju-ChrAlju05 42351173 42361045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1344 46 431 Antiporters AT1G55730 74.235 0.0 587