Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1340 ATGAGGCCAGGTCAGTCGCCCCCGGGTCCCGGAGCTCCGAATCGTGACCGTAAGAGTTTTGGCCGTAAACAACTGACCTTGCCGCTGCCGCTGCGTGACCCTTCAAAACCGGTGCCTCTTCCTCTTCCACCCTCCAACTCGGGGGGGCCTTCGACGAGTCTCCATGCCGGCCCGGTTCACCAGCTCATCCCCTTCACGGAGCTTGAACGGCTCAACCGAATCGGTAGCGGTGCTGGCGGGACTGTCTACAAGGTCGTCCACCGACCCACTGCTCGGGTTTTTGCGCTGAAGGTTATTTACGGCCATCACGAGGACTCCGTACGCCGACAGATCCTTCGCGAAGTCCAGATCCTTCGGGACGTGGATGACCAGAACGTGGTCAAGTGTTACGATATGTATGATCACAACGCTGAAATCCAAGTGCTTCTCGAGTTCATGGACGGTGGGTCCTTGGAAGGGCAACACATCCCCGACGAGCAGCGCCTCGCAGATCTAGCTCGTCAGATTCTTCGTGGCCTCGTCTACCTTCATCGCCGCCACATCGTTCACAGAGACATCAAGCCATCGAATCTGCTGATCAACTCGCGCAACCAAGTCAAGATTGCAGACTTCGGTGTGGGTCGGATTCTTGCGCAAACCATGGATCCGTGTAATTCATCGGTGGGGACGATCGCTTATATGAGCCCCGAGAGAATCAATACAGACATCAACGACGGACAATACGATGCGTATGCCGGCGATATATGGAGCCTTGGAGTGAGTATACTGGAGTTTTACATGGGTAGATTTCCCTTCGCGGTGGGAAGGCAAGGGGATTGGGCCAGTTTGATGTGTGCGATTTGTATGTCTCAGCCGCCGGAGGCGCCGGCTACGGCGTCGAGTGAGTTTAGGGATTTCATATCGCGCTGTTTGCAGAGAGATCCGTCGCGGAGGTGGACGGCGTCGAGATTGTTAGGGCATCCTTTTATAAATCCGGGAATTCGACAACAGAACCCAGTTTATCAGAATCTTCATCAGCTGCTACCTCCTCCTCGCCCGCTTTCTTCCTAG 1050 0.5533 MRPGQSPPGPGAPNRDRKSFGRKQLTLPLPLRDPSKPVPLPLPPSNSGGPSTSLHAGPVHQLIPFTELERLNRIGSGAGGTVYKVVHRPTARVFALKVIYGHHEDSVRRQILREVQILRDVDDQNVVKCYDMYDHNAEIQVLLEFMDGGSLEGQHIPDEQRLADLARQILRGLVYLHRRHIVHRDIKPSNLLINSRNQVKIADFGVGRILAQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPATASSEFRDFISRCLQRDPSRRWTASRLLGHPFINPGIRQQNPVYQNLHQLLPPPRPLSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1340 349 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Alju05g1340 349 ProSiteProfiles Protein kinase domain profile. 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1340 349 FunFam Mitogen-activated protein kinase 2 148 334 - -
Alju05g1340 349 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 64 325 - -
Alju05g1340 349 CDD PKc_MAPKK_plant_like 67 324 - -
Alju05g1340 349 Gene3D Phosphorylase Kinase; domain 1 54 147 - -
Alju05g1340 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
Alju05g1340 349 SMART serkin_6 68 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1340 349 MobiDBLite consensus disorder prediction 1 57 - -
Alju05g1340 349 MobiDBLite consensus disorder prediction 32 46 - -
Alju05g1340 349 Pfam Protein kinase domain 69 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1340 349 SUPERFAMILY Protein kinase-like (PK-like) 67 343 IPR011009 -
Alju05g1340 349 Gene3D Transferase(Phosphotransferase) domain 1 149 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1340 Alju-ChrAlju05 42304143 42305192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1340 1 349 MAP Kinase Kinase Gene Family AT3G21220 70.195 2.99e-167 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Alju05g1340 Pkinase 1.4e-64 CL0016