Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1330 ATGAAGCTGCTATTATTTATCCTATGCTTGTCTGCATCTTTCTATGTTACTCGTACCTTGAGTTTGGATGGGTTGACTCTATTATCACTCGTCAACCACTGGACTTCTGTGCCTCCTTCCTTTAATTCAAGCTGGAAGTCCTTTGATTCTACTCCTTGTTCATGGCCAGGGATACAATGCGACCATTACAAAAACGTGGTCTCCCTAAACCTCACTGCATCTCATATTTTTGGTCGCCTTGGGCCAGAAATTGGACAGTTGACTCGCTTGCAGATACTTTTGTTGGCCTCAAATGGTTTCTCAGGTACAATACCTGCTGAGTTAGGTAATTGTAGTATGCTTGAGTATATCGATCTTTCGGAGAATCATTTGTCAGGAAATATTCCTCCAGAAATTGGTAATTGCAAATATTTGAAGTCGTTACTTTTATATTCCAATCAACTAGAGGGAGCAATTCCAAATGAATTGGGAAGACTAAGTAAATTGGAGGACCTCGAATTATATTTCAACCGTTTGACTGGTGAAATTCCGCTTACCATTTGGATGATTCTGAGTCTTAAGCATGTCCTTCTTCATAATAATAGCCTTTCTGGGAAATTGCCTTCAGAGATGACAGAGCTCAAGCATCTGAAACATATCTCATTGTTTGACAACCAATTCTTTGGACCAATTCCTCAAAGCTTTGGAATCAATAGCAGGGGCATACCTCAAGATTTGGGAAGATGTGCAACTCTTGGGAGGTTAGTTCTCAATGAAAATAATCTTTCTGAGTCTCTTCCTGAATTTGAAGGTAATCAGAATCTCATATACATAGACATGAGCAAGAACAACATCAGTGGAGTAATTCCATCAAGTTTGGGAAACTGCAAAAATCTCACAGCTCTAATTTTGTCCACAAATAACATTACAGGGCCTGTACCCTTTGAGCTAGGAAATCTTGTGAACCTTCACGCTTTGAATCTTGCTCACAACAACTTAGAAGGTCCTTTGCCACAGGAGCTGTCATACTGTACCAAAATGTTGACATTTGATGTGGGATTCAATTTTCTTAATGGTTCTTACCCATCAAGCATGAAGAGCTGGACAGGGTTAACCAACTTAATTTTAAGAGAGAATCATTTTACTGGGGTCATCCCATCTTTCTTGTCAGAATATGATCAATTACTTGAGCTACAGCTTGGAGGAAATATGTTTGTGGGGAGGATTCCTACGTCAATTGGATCATTGCAGAATCTCTTATACGGGTTGAATCTGAGTGCTAATAGATTAACTGGTGAGATTCCCTTAGAACTTGGGAAGTTGCAAAAGCTGCAAAGCCTGGATATATCGCTGAACAATTTGACAGGGGGCATACGTGTTCTTGGTGAACTTTCTTCATTAATGGAAGTCAATATCTCATACAACTCATTCGTTGGTCCTTTACCAGAATGGAGAATTCAACATCTGAATTTATCTCCATCATCGGTCTTGGGCAATCCTGGCCTTTGTGTCTATTGTTCAACCTCAAATGGCTCCAGTTGCGCAAACTCTAGCCTATTGAAGCCATGTGACTCTGAATCAACTGACCACAAAGGCAGTAGACGTTCAATTTTATTTATAGCACTTGGATTTGTAGGGTTTGTCATCTGTCTGTCAGGTGTACTGCTATTTTATGACCATCGTCATAGACAGAGATTGAAGGAGGAAGAGGAACTTGTTGCTTATTATGATGAACAAGACCGTTACGATCGTGAGTTTCGTGAAAGATCTGTGCTGGTGTCAAATACTGATTGTGAAGAGCCAGAGGCTCTGTATTCAAATGATGAAGTTGATTTCAGAATTATTGATATACTAAATGCTACAGAAAATCTGCATGATCAATATATAATTGGCCAAGGTGGCCATGGAATTGTCTATAAAGCTGAACTTGATTCTGGAGTTTTTGCTGTTAAGAAGGTTAAATTTGGACGGAGCAATAGGAGGAAATTAAACATGATCAAGGAAATTGAAATGACTAGGAAGATGAGGCATCAAAATGTGGCAAGATACCTAGGCTTCTGGACTGGTGAGGAATATGGTCTAACCATCAGCAAGTACAAGGAAAATGATAGCCTTCATGATGTTTTGCATGAACACAAGTCACAACCACCCTTGGCATGGAATGTCCGCTATAAGATTGCTATTGGAATTGCAAAAGGATTAGCATATCTCCATCATGACTGTGATCCTCCCATTTTGCATCGAGACATCAAACCAAAGAATATACTCCTTGATTTTGACATGCAACCTTGTATTATTGATTTTGGTATTTCCTTTGCTTTGAATCAATCCTCTGCTACGATGAATATGCGGTCAACATATCATCTAGGTACACCAGGGTTTATGGCACCAGAGATTGCATATGCGATAGTGCCGAGCAGTGAGTTTGATGTATATAGCTTTGGGGTAGTTTTGCTTGAGTTGATTACCGGAAAGAAAGTATTAGATTCCTATTTTTTGGAGGAGGAAACCACTTTAGTAGGTTGGTTTAAATCTGTATGGAGGAGAACAAGTGAACTTGAAGAGATTGTTGATTCAAGCATTGCAAGGGAGCTTTCAGATTTGAACGTAAAGGGGCAAGTTATCAAAGTGCTTTTGGTGGCTTTAATATGCACTCAAAAACATCCAAGAAAGAGACTGAAAATGTTAGATGTTGTTGAATTCTTTGAAACACCCACAGATCCTGGTATTTTTGTTCGGCATGACACAGCTCAATTTCATTTGGGGATCTTCCTCACTGCTGCTGGGGCCTCTAATCTTTTTGAGGAGGAAGTCGAGATCCTTGCCAATGGAGGTTCTTTCTCAGTTCCTTACAAAGTGATGTTTGAGGCTGCAGCAAATTCAAATAATCTGAATATGATTTCCACAAGAACGCGAGGAGTTGTTTCTAAAGTACAACTACATTCAGGCCTAATTTGTTCTGAAAGGAAGGTTACTTTCTCTGGGAACAAAGGCAGTAGCTCAAGCATGTGTAGAGAAATTGAAATCCTTGAAAAGATTAGGCACCGAAATATAGTCAGAATGGTAGAGTATATGCTTAGAGAAGACTACGGTATAATCTGGTACGAGTACATGCCAAATGGAAACCTTAATGATGTTTTGCATGAAATGAATCCGCCACCATTCCTGAAATGGAATGTCCGTTATAAGGTAGCCAGCGGAATTGCTCATGGATTGGCCTATCTTCATTATGATTGTCATCTTCCCATTGTGCATTGTGCCATCAAACCAAGAAATATACTTCTAGGATATGATATGGAGCCTCGAATTGTTGATTTCGGTTTTGCCCAGTTTGTGGATCAATCTTCATCTGTTCCAGGCACACACGGATATATTAGCCCAGCAAAAACCAGGGAAGCTGATGTCTACAGTTATGGGATAGTTTTGCTTCAGCTGATAACCAGAAAGAAGGCAGTAGACCCATCATTTATGAATGGAACTGAGATAGGAATTTGGGTCAGAACTCGATGGAGGGAAACAGGAGATATTAATACCATTGTTGATTCAAGCCTTGCAGAGGAGGTTTTGGATTCAGATGTATTTGAACAAGTTACCAAAGTGCTTTTGCTGGCTCTGCGTTGCACAGAGATGGATCCATACATGAGACCCACAATGGAGGATGTTAGGGGTGTTCTCAAGATGGGACGGGATCAGAAAATCTCATTCTAG 3687 0.4001 MKLLLFILCLSASFYVTRTLSLDGLTLLSLVNHWTSVPPSFNSSWKSFDSTPCSWPGIQCDHYKNVVSLNLTASHIFGRLGPEIGQLTRLQILLLASNGFSGTIPAELGNCSMLEYIDLSENHLSGNIPPEIGNCKYLKSLLLYSNQLEGAIPNELGRLSKLEDLELYFNRLTGEIPLTIWMILSLKHVLLHNNSLSGKLPSEMTELKHLKHISLFDNQFFGPIPQSFGINSRGIPQDLGRCATLGRLVLNENNLSESLPEFEGNQNLIYIDMSKNNISGVIPSSLGNCKNLTALILSTNNITGPVPFELGNLVNLHALNLAHNNLEGPLPQELSYCTKMLTFDVGFNFLNGSYPSSMKSWTGLTNLILRENHFTGVIPSFLSEYDQLLELQLGGNMFVGRIPTSIGSLQNLLYGLNLSANRLTGEIPLELGKLQKLQSLDISLNNLTGGIRVLGELSSLMEVNISYNSFVGPLPEWRIQHLNLSPSSVLGNPGLCVYCSTSNGSSCANSSLLKPCDSESTDHKGSRRSILFIALGFVGFVICLSGVLLFYDHRHRQRLKEEEELVAYYDEQDRYDREFRERSVLVSNTDCEEPEALYSNDEVDFRIIDILNATENLHDQYIIGQGGHGIVYKAELDSGVFAVKKVKFGRSNRRKLNMIKEIEMTRKMRHQNVARYLGFWTGEEYGLTISKYKENDSLHDVLHEHKSQPPLAWNVRYKIAIGIAKGLAYLHHDCDPPILHRDIKPKNILLDFDMQPCIIDFGISFALNQSSATMNMRSTYHLGTPGFMAPEIAYAIVPSSEFDVYSFGVVLLELITGKKVLDSYFLEEETTLVGWFKSVWRRTSELEEIVDSSIARELSDLNVKGQVIKVLLVALICTQKHPRKRLKMLDVVEFFETPTDPGIFVRHDTAQFHLGIFLTAAGASNLFEEEVEILANGGSFSVPYKVMFEAAANSNNLNMISTRTRGVVSKVQLHSGLICSERKVTFSGNKGSSSSMCREIEILEKIRHRNIVRMVEYMLREDYGIIWYEYMPNGNLNDVLHEMNPPPFLKWNVRYKVASGIAHGLAYLHYDCHLPIVHCAIKPRNILLGYDMEPRIVDFGFAQFVDQSSSVPGTHGYISPAKTREADVYSYGIVLLQLITRKKAVDPSFMNGTEIGIWVRTRWRETGDINTIVDSSLAEEVLDSDVFEQVTKVLLLALRCTEMDPYMRPTMEDVRGVLKMGRDQKISF 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1330 1228 SMART serkin_6 617 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1330 1228 SMART serkin_6 928 1218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1330 1228 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Alju05g1330 1228 Gene3D Phosphorylase Kinase; domain 1 943 1031 - -
Alju05g1330 1228 SUPERFAMILY Protein kinase-like (PK-like) 603 895 IPR011009 -
Alju05g1330 1228 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 138 893 - -
Alju05g1330 1228 Gene3D Phosphorylase Kinase; domain 1 581 692 - -
Alju05g1330 1228 Gene3D Transferase(Phosphotransferase) domain 1 694 901 - -
Alju05g1330 1228 Gene3D Transferase(Phosphotransferase) domain 1 1032 1227 - -
Alju05g1330 1228 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 19 180 - -
Alju05g1330 1228 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Alju05g1330 1228 SUPERFAMILY L domain-like 236 496 - -
Alju05g1330 1228 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 693 900 - -
Alju05g1330 1228 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 229 511 - -
Alju05g1330 1228 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Alju05g1330 1228 Gene3D Ribonuclease Inhibitor 233 506 IPR032675 -
Alju05g1330 1228 SUPERFAMILY L domain-like 23 261 - -
Alju05g1330 1228 ProSiteProfiles Protein kinase domain profile. 617 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1330 1228 ProSiteProfiles Protein kinase domain profile. 954 1228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1330 1228 Pfam Protein kinase domain 619 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1330 1228 Pfam Protein kinase domain 986 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1330 1228 Gene3D Ribonuclease Inhibitor 180 232 IPR032675 -
Alju05g1330 1228 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1031 1227 - -
Alju05g1330 1228 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Alju05g1330 1228 SUPERFAMILY Protein kinase-like (PK-like) 937 1218 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1330 Alju-ChrAlju05 42139279 42144815 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1330 64 913 Receptor kinase-like Gene Family AT1G17750 43.113 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju05g1330 Pkinase 5.7e-31 CL0016