Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1320 ATGGGTGCTGAGCCTCGCGAAGCCGTAGATTTTGAGCTGGTTCAGTGGAGCTTCCGCAGGCATCGTCAAAAAATGGTTGAGGAGGTTAAGGCAATTGTTCCCGAGTCTGTGTTGAAGAAGAGGAAGAGAGAAGAGGAATGGGCTTTGGCAAAGGCACAGGAGACTGAAGCTGCAAAAAAGAAGAGAGCAGAGAGCCGCAAGGTGATCAAGAAAAGAACTGAGCAGTATTACAAGGAGTATGCGGATCAGGAGAAGGAGTTGATCAGATTGAAACGTGAGGCTAAGCTGAAAGGTGGATTTTATGTAGATCCAGAGGCTAAACTATTGTTTATCATTCGCATCCGTGGTATTAATGCCATGCACCCAAAGACAAGGAAGATCTTGCAGCTCTTGCGTTTGAGGCAGATATTCAATGGCGTGTTTCTTAAAGTTAACAAGGCCACAATGAACATGCTTCACAGGGTTGAACCATATGTGACGTATGGGTATCCAAACTTGAAGAGTGTAAGAGAACTTGTTTACAAGAGGGGCCGGGGTAAGATCAACAGACAGAGAATTCCTTTAACCGACAATTCCATCATTGAGCAGGCCTTGGGCAAGTATGGAATCGTATCCACTGAAGATCTCATCCACGAGATCATAACAGTTGGTCCTCACTTTAAGGAGGCCAACAACTTCCTCTGGCCCTTTAAACTTAAGGCACCTCTGGGTGGACTAAAGAAGAAGAGAAACCACTATGTTGAAGGTGGTGATGCTGGAAACCGGGAGAATTACATCAATGAGCTCATTAGGAGAATGAACTAG 804 0.4527 MGAEPREAVDFELVQWSFRRHRQKMVEEVKAIVPESVLKKRKREEEWALAKAQETEAAKKKRAESRKVIKKRTEQYYKEYADQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELVYKRGRGKINRQRIPLTDNSIIEQALGKYGIVSTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1320 267 Coils Coil 73 93 - -
Alju05g1320 267 Gene3D - 211 267 IPR036919 -
Alju05g1320 267 Gene3D - 108 210 IPR036919 -
Alju05g1320 267 FunFam 60S ribosomal protein L7 213 267 - -
Alju05g1320 267 ProSitePatterns Ribosomal protein L30 signature. 127 159 IPR018038 -
Alju05g1320 267 PANTHER 60S RIBOSOMAL PROTEIN L7 31 267 IPR039699 -
Alju05g1320 267 NCBIfam 60S ribosomal protein uL30 34 267 IPR005998 GO:0000463|GO:0003735|GO:0022625
Alju05g1320 267 Pfam Ribosomal protein L30p/L7e 109 159 IPR016082 -
Alju05g1320 267 FunFam 60S ribosomal protein L7 108 212 - -
Alju05g1320 267 CDD Ribosomal_L7_archeal_euk 108 267 IPR035808 -
Alju05g1320 267 Pfam Ribosomal L30 N-terminal domain 33 104 IPR012988 -
Alju05g1320 267 SUPERFAMILY Ribosomal protein L30p/L7e 108 267 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1320 Alju-ChrAlju05 42009878 42015530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1320 28 267 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 82.917 1.26e-147 411