Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1318 ATGAAGCTAAGAAGAATTTGTGAGTTGTGTGGCGAAGAGGCTTACCTGTATTGTGGCCCTGATTCTGCGTTTCTGTGTTTGAAATGTGATGAGAAGGTTCATGATGCCAATTTTTTGGTTGCTCGTCATATTAGAGAGGTTCTCTGTTGCAATTGTAGGTGTTTGGCCGGAAGGCAGGTCTCCGGCTGTGTTGCTCCGTTTGAAACCATAGCCTGTCAGTCTTGTTCGCCGGAGAATCCCTCCGACGAGGACGATTGCTTGTCTTCATCGTCTACGTCGGCCTGTGTTTCAAGCACCGAGTCCTGTACGACAGGTCCGAAGAAGATTCAGCGTCGGACGGAGACAGTGGTGTCGTCGGGTTCAGTTACAGATGAGAAGTGCACCGTCGGGGAAGGGAAGAAGGATAATCCTGTACGACAGGGCGCTGCGGGGGAGATTTTTGTGAATTGGAGCAGAAAGTTAGGAGTTAATGGTAATTGTGTGGTCTCGTTGGCCTCGCCGGCCCTGGGGAAGCTAATGGCGGTGGTTCCGTTTAGAGTTGCGGTGGCGACGTCGTTTTGGTTCGGCCTGAGATATAGCCGCGACGGGGAGTCACGAACAGCGCAGATGTTGAGAAAGTTAGAGGAAATGTCGAAAGTGCCCGGCAAGGTGATCGTGGCGGCCGAGGAGAAGCTGATACGTGCCCTCAGACCCAAAAGAGCAAGGCGCGAATTCGAGGAAGGGTGGGCCGAGAGCTCACCCTTCAAATGA 750 0.5267 MKLRRICELCGEEAYLYCGPDSAFLCLKCDEKVHDANFLVARHIREVLCCNCRCLAGRQVSGCVAPFETIACQSCSPENPSDEDDCLSSSSTSACVSSTESCTTGPKKIQRRTETVVSSGSVTDEKCTVGEGKKDNPVRQGAAGEIFVNWSRKLGVNGNCVVSLASPALGKLMAVVPFRVAVATSFWFGLRYSRDGESRTAQMLRKLEEMSKVPGKVIVAAEEKLIRALRPKRARREFEEGWAESSPFK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1318 249 CDD Bbox1_BBX-like 6 45 - -
Alju05g1318 249 SMART bboxneu5 2 48 IPR000315 GO:0008270
Alju05g1318 249 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 101 - -
Alju05g1318 249 Pfam B-box zinc finger 5 35 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1318 Alju-ChrAlju05 41949188 41949937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1318 6 245 C2C2-CO-like Transcription Factor Family AT3G21150 37.097 2.24e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju05g1318 zf-B_box 4.6e-05 No_clan