Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1300 ATGCATGAAGCAGCAATAATGGATTCAATGAAGTCTAACAAGATCACAGAAATCGTCAAACTTCAACAAATCCTCAAGAAATGGAAGAAGTTTGCAACTTCCTCTTTGTCCTCCTCCTCCTCTTCAGCCACCGTGACCTCCCCAACCGCCTCCGGAGCCGCCACCACCGGCAGTAAAAACAAAGGCATCAAGTTTATCAAAAGAACTCTCTCATTCACCGACGTCGTTTCACCACGCTCCGGCCACGGCGGCGTTGTCGTCCCCAAAGGGTTTATCGCAGTCTGCGTCGGAGAAGAGCTCATGAGATTCACCATTCCGATGGAATACTTATCACACCCAGCATTTGAGGTTCTGCTGCGAGAAGCTGAAGAGGAATTCGGATTCCATCAAGAAGGAGTACTCAAGATTCCATGCCACGTGTCATCTTTTGAGAAGGTATTGAAGGTGGTAGAACAAAAGAAACCAATGTTCTTGGGTGAAGAAGATAAGGACGCTTGTTTTACTTGTTACAGCTCAGATTGTGAGGTTTCTCCTAATACTCATCATCATGCTGTTCAAGCCTGTAGATGA 570 0.4632 MHEAAIMDSMKSNKITEIVKLQQILKKWKKFATSSLSSSSSSATVTSPTASGAATTGSKNKGIKFIKRTLSFTDVVSPRSGHGGVVVPKGFIAVCVGEELMRFTIPMEYLSHPAFEVLLREAEEEFGFHQEGVLKIPCHVSSFEKVLKVVEQKKPMFLGEEDKDACFTCYSSDCEVSPNTHHHAVQACR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1300 189 MobiDBLite consensus disorder prediction 38 57 - -
Alju05g1300 189 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 55 146 IPR003676 GO:0009733
Alju05g1300 189 Pfam Auxin responsive protein 67 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1300 Alju-ChrAlju05 41716387 41716956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1300 7 189 Calmodulin-binding Proteins AT2G24400 47.692 6.23e-51 160