Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1290 ATGCGCCACAACCTTGCTGGGCTGTGGATCTCTCTGCTCGCGGTCTTCACCACCGCAGTTCATTGCAGGACTGACTCCAAGGATGTTTCAGCCCTCAATGGGATGTATTCCAGTTTAAGATCTCATTCTCAATTGGAAGGCTGGAAATCAAGTGGGGGTGATCCTTGTGGCGACTCGTGGAAAGGAATCAAATGCTCAGGCTCATCGGTCACAAAAATAAATCTGTCTGGCCTAGGACTTACTGGATCAATGGGCTACCATCTGGCAAACATGGCATCAATTACCCACTTTGACTTGAGCAAAAACAACCTTAATGGTGATCTACCGTATCAACTTCCCCCAAATTCTCGGTACATTGATCTTTCCAAGAATAGCTTCACTGGAGTGGTTCCTTTTTCCATTTCTGAGATGACCAATCTTAACACCCTAAATCTTGCGCATAATCAACTCAATAATCAGCTGGGTGATATGTTTGGGAAACTCACTAAACTCAAACTAATGGATTTATCATTCAATTCACTGTCAGGAAATTTGCCGCGGAGTTTTAAATCACTCTCAAGCCTCAAAAAGTTGAATCTTCAAAATAATCAATTCTCAGGTTCAATAAATGTGCTTGCGAACCTTCCACTTGAAGAGTTGAATGTTGAAAATAACAAATTTTCTGGTTGGATCCCAGCAGAGCTAAAGAATATAAGTAGCTTGCGAACCGGAGGAAACTCTTGGTCAACAGGGCCAGCTTCTCCTCCTCCTCCTCCTCCTGAAAAGGGAATTGGGAAACCTGCTGTTATTGGAATTGTTATAGGAAGCATAGCTTTTGTTTTGCTCGTAGTTAGTGTTGTTGTTGCTGTCGTTAAAAAAAGATCATCTCCACCTCCTTCAAGATTTCTTGATGAAGAGCATAACCATCATAGATCTCCTACACCTCTTGCTTCTCAGGAATTATCCAAAAATGTTTCTGAATTTAAGCCTTCGGATTCTGCTTTGATTGACATTAAGGCGTTACCAGAAGTTCCATCATCTGGTGCGAGGTCATCAGCTTCTGATTGTGTACAAACCTTGGATGATAACGAGATTGCAAATCGTCTAAATGCTGCAAGAAGCATCTCGATTCGTGTTGTTCATCATTTTCCATTTGCAGATTTGCGGGCTGCTACTGGTAATTTTGCATCAAGTCGCCTTATTGGGGAAGGATCCATTGGAAGTGTTTACCGGGCAAAATATGCTGATGGACAGGTTTTAGCTGTGAAAAAACTTGACTCTACCAAATTCCTTGGCAGCTCTCCAGAGGAATTCTCTCAGATTATATCGGAAATTTCCTATGTTCACCACCCAAATATTGCTGAGCTTGTTGGTTATTCTTCAGAACGAGACATCATGTTAGTATATCAGTATTTCCGAAATGGCTCTCTTCATAAATTTTTACATGTGTCAGATGACTTCAGCAAGCCACTAACCTGGAACACTAGAGTCAAAATCGCACTAGGCACTGCTCAAGCAATTGCGCACCTGCATGAAAGTTGTTCTCCACCTATAGTTCACAAGAACATCAAGTCTTCCAATATTATGCTTGACAACGAATTCAATCCTCTTCTCTCAGACTCTGGCTTGGCATCCTTCCATCAGCGCACTAGCCAAAATCTTGGGGCAGGATATAAAGCACCCGAGTGTTCAATACCTGAAGCTTATCCCCTGAAGAGAGATGTGTACAGCTTTGGGGTAGTCATGCTGGAGCTGTTAACAGGTCGAAAGCCTTTGGACAGGTCAAAACCAATATCAGAACAATGTCTTGTTCTTTGGGCCACCCCTCAGCTTCATGACATTGTTTCATTGTCAAACATGGTGGATCCTTCCTTGCGAGGACTTTACCCTCCTAAATCACTCTCAATGCTTGCTGACATCATTGCTTTTTGTGTTCGGCCTGAGCCGGAATTTCGACCACCAATGTCGGAAGTGGTTCTCTCACTGGTAAGACTAGTTGAGCATTCAAATATGAACATGAGAGAGGATATGGATCTTGGGATGGATGATAATGATGACTGA 2040 0.4265 MRHNLAGLWISLLAVFTTAVHCRTDSKDVSALNGMYSSLRSHSQLEGWKSSGGDPCGDSWKGIKCSGSSVTKINLSGLGLTGSMGYHLANMASITHFDLSKNNLNGDLPYQLPPNSRYIDLSKNSFTGVVPFSISEMTNLNTLNLAHNQLNNQLGDMFGKLTKLKLMDLSFNSLSGNLPRSFKSLSSLKKLNLQNNQFSGSINVLANLPLEELNVENNKFSGWIPAELKNISSLRTGGNSWSTGPASPPPPPPEKGIGKPAVIGIVIGSIAFVLLVVSVVVAVVKKRSSPPPSRFLDEEHNHHRSPTPLASQELSKNVSEFKPSDSALIDIKALPEVPSSGARSSASDCVQTLDDNEIANRLNAARSISIRVVHHFPFADLRAATGNFASSRLIGEGSIGSVYRAKYADGQVLAVKKLDSTKFLGSSPEEFSQIISEISYVHHPNIAELVGYSSERDIMLVYQYFRNGSLHKFLHVSDDFSKPLTWNTRVKIALGTAQAIAHLHESCSPPIVHKNIKSSNIMLDNEFNPLLSDSGLASFHQRTSQNLGAGYKAPECSIPEAYPLKRDVYSFGVVMLELLTGRKPLDRSKPISEQCLVLWATPQLHDIVSLSNMVDPSLRGLYPPKSLSMLADIIAFCVRPEPEFRPPMSEVVLSLVRLVEHSNMNMREDMDLGMDDNDD 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1290 679 ProSiteProfiles Protein kinase domain profile. 388 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju05g1290 679 MobiDBLite consensus disorder prediction 291 306 - -
Alju05g1290 679 MobiDBLite consensus disorder prediction 235 255 - -
Alju05g1290 679 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 74 655 - -
Alju05g1290 679 SUPERFAMILY L domain-like 24 236 - -
Alju05g1290 679 SUPERFAMILY Protein kinase-like (PK-like) 369 655 IPR011009 -
Alju05g1290 679 Pfam Leucine rich repeat 117 174 IPR001611 GO:0005515
Alju05g1290 679 Pfam Protein tyrosine and serine/threonine kinase 391 654 IPR001245 GO:0004672|GO:0006468
Alju05g1290 679 Gene3D Transferase(Phosphotransferase) domain 1 465 677 - -
Alju05g1290 679 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 354 464 - -
Alju05g1290 679 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Alju05g1290 679 Gene3D Ribonuclease Inhibitor 24 250 IPR032675 -
Alju05g1290 679 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Alju05g1290 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 253 - -
Alju05g1290 679 MobiDBLite consensus disorder prediction 288 314 - -
Alju05g1290 679 Gene3D Phosphorylase Kinase; domain 1 350 464 - -
Alju05g1290 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 465 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1290 Alju-ChrAlju05 40910212 40924754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1290 1 679 Strubbelig Receptor Gene Family AT1G78980 55.029 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Alju05g1290 PK_Tyr_Ser-Thr 7.6e-33 CL0016