Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1285 ATGAGAGCAATCTCAGGTTCTAGCAAGTTATCATGGGAAACAGGTTTGGGAGAAGCATATGGTCACTATAAAGAACTATGGAATCAATGTGAAAGACTCTTGGTCAGTGTACCCCGACAGGGGGAAAGATGTTTCTATTTTCCCCAAGGGCATTTTGAACAACTAAGTTTTTCAACAGAGCAAGAATTCCACCATGGAGCTTCTCATTTTAATGTTCCTTCTCAGATTCTCTGTAGAGTCCTAAACGTTCAGCTTTTGGTTGAACCTGAAACTAATGAAATTTACTATTGCTTCACTCTGATTCCGGATCCTCAATCAGATCCAACAGTTCCAGATCCAAACCCACCTGAAATACAAAGAGAAGAAATTCACTCAATGTTCAACATATTAATGGCCTCTCTTATTACTAGTACACATGGAGTTTCAGGTAGGCAAGAAAGTCCTATTCCTTCTTCATCTGAGATTTCAAGACAGAATGTGCACCTAGGAGCACTTGCAACTGCCTCACATTCAGTCATAACTGGCGCTATGTTTATGGTCTATTACAAACAAAGGGCTAGCCAGTTTGTTATTCGTCTGAACAAATACCTAGAGGCAGTGAACCAAAACATTCATGTTGGTATGAGGTTCAAGATGAGATTTCAAAGAGAGGACTCACTTAATGAGATGCTTTCCTATGGCACTATTGTTGGAATCAGAGATTTCTCTTTGCAATGGCCTAATTCCAACTGGAGATCATTGCAGGTCCAGTGGGATATACCTGCATCAATCCAAAGGCCAGAGAGGGTCTCGCCGTGGGAAATAGAACCTATTTTAGCTCCTCGTGTTCGAAATGTTTCAAATCCAATATCAGTTAAGAGCGATAGGTTCAAGCCTTGTTGCATTCCATCTTCTAAACTGGCTTTCAACTCGAATGGTTCTCCACAAGGGAACTTTAATAACATGTCAGAAATGCGAGTGGATGGAATATGGACAACTACTTCTCCACTTTTGAATGAATCCTCAAGTTTTATTTCTGAACATGGAAAGGACAAAGATGGTTTGAATGAGTTTTCAAGTCTCTTTCATAACCTGGAAGTGACAAAGCTAGACAAGGACTGTGTGGTTTCACACGCAGGACAAACGACGGCAACCGGACTTTGGGTTTTTCACCGATCGGTGGCTTCTGGTCTGGCGTGTGTTGCAAGGAACGAGAAAAGAGCTGAAAGGAACGATAGCAGAGGGACTTCTAAACAAACCCTGGCACTTTGA 1251 0.4165 MRAISGSSKLSWETGLGEAYGHYKELWNQCERLLVSVPRQGERCFYFPQGHFEQLSFSTEQEFHHGASHFNVPSQILCRVLNVQLLVEPETNEIYYCFTLIPDPQSDPTVPDPNPPEIQREEIHSMFNILMASLITSTHGVSGRQESPIPSSSEISRQNVHLGALATASHSVITGAMFMVYYKQRASQFVIRLNKYLEAVNQNIHVGMRFKMRFQREDSLNEMLSYGTIVGIRDFSLQWPNSNWRSLQVQWDIPASIQRPERVSPWEIEPILAPRVRNVSNPISVKSDRFKPCCIPSSKLAFNSNGSPQGNFNNMSEMRVDGIWTTTSPLLNESSSFISEHGKDKDGLNEFSSLFHNLEVTKLDKDCVVSHAGQTTATGLWVFHRSVASGLACVARNEKRAERNDSRGTSKQTLAL 416
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1285 416 Pfam Auxin response factor 168 248 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Alju05g1285 416 Gene3D - 203 274 - -
Alju05g1285 416 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 23 140 IPR044835 GO:0003677|GO:0006355|GO:0009725
Alju05g1285 416 FunFam Auxin response factor 203 275 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju05g1285 Alju-ChrAlju05 40818670 40822098 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1285 143 294 B3 DNA Binding Superfamily AT3G61830 50.658 2.92e-43 157