Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1271 ATGGAGCTGAAGAAGGCAATGAGAATGATGGACAAAGAGGAGCCTTTAGAGAAGTTTCTTGAGCTTTTTATGAAGGAGCAGCTCTATACTCTTGTTAGGCAAGATGTAGAGAAGTACCTGGATTTTATCGACAACGTCTTTCAGCTAGCAGACGTTGACCTTGCCCACCAAAAAATCTTCATCCACAGTCTTCGTTGGGACACCACTGCTGAAACCCTTACGAGTGCTTTTTGGAAGTATGGCGAGATAAAGGATTGCAAGGCTATCATCGACAGAGTCTCAGGAAAATCAAAAGGTTATGCCTTCATCGGAGTTCTGAAGGAGTATGTATATCTTGTCTCTTTTTTTTAA 351 0.4188 MELKKAMRMMDKEEPLEKFLELFMKEQLYTLVRQDVEKYLDFIDNVFQLADVDLAHQKIFIHSLRWDTTAETLTSAFWKYGEIKDCKAIIDRVSGKSKGYAFIGVLKEYVYLVSFF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1271 116 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 57 103 IPR000504 GO:0003723
Alju05g1271 116 SMART rrm1_1 58 116 IPR000504 GO:0003723
Alju05g1271 116 SUPERFAMILY RNA-binding domain, RBD 52 103 IPR035979 GO:0003676
Alju05g1271 116 PANTHER GEO13361P1-RELATED 50 103 - -
Alju05g1271 116 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 59 103 IPR000504 GO:0003723
Alju05g1271 116 Gene3D - 55 104 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1271 Alju-ChrAlju05 40678420 40678770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1271 11 103 C2H2 Transcription Factor Family AT2G19380 38.710 2.83e-19 80.1