Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1264 ATGGGAAGGAGAACTGGAAGAAGGTCACTGCATGAAATTCTTCGTCGTCGCCTTGAGTCCTGCAAATCCAGGTACTCAACTATTGATGAAATTGTAAACCATCTTCGCGCAAATTACCCTGATTACCAGCGAACAAAACAACAAAATTTGACTCGATTTGTTCAAGAAGCTTTGGAGTCATCTAAGCGTGGGAACAAGCAATTGAACAGAAAGCCCAATACTTCCATGTTGAAGCCTGACGGTTCAGAAGATAGTGATGAAGATGAAGAAGAAGAAGAAGGTCGAAGTGCATCTCAAAAGAGGGCCAAGAAAGTTGAAGAAGGTGAAGAGAGATTGCAAAAAACGGAGAGTTTACACCTTCAAAGGTTACAAAGGGATCGGAGCCGCCGTTTATCAACCTCTTCTGCCTCAACCTCTAGTCCGTCATCGTCATCAGAGTCTGAAGAGAGTGATGGCGAAGATGGGACTGTGTCTACATCAGAGGATGCAATTTATGAGGAGAAAGTGGAACCAGCCTTTGACTTGACGAAAACAATGTTGCGGGCTTCATACTCAGGAACAAAGAATGTGAAATCTACAGCAGAGGAGAAAAACGTTGCACTGGAAGTGACTAATAATAATAAGGCAACTAAGATTGATGCTATGTATGGGGTTGGAGGTAACATGAAAGATGATTTGGAACCAAAAAGGCAATTGAGAGGTTCAGTTTCGAATGGCAATGGTGATGTTGAGGTCAAGGGGAAGGGTGGCCCAAGATTCAAAGATTTGGGTGGGATGGAGAAGGTACTGGAGGAATTGAAGATGGAAGTAATTGTTCCTCTTTATCATCCGCAGTTGCCAAGAAAGTTAGGAGTGAGACCAATGGCAGGGATTTTGTTACATGGACCCCCAGGGTGTGGGAAAACCACTCTGGCTCTTGCTATAGCTAATGAGACTGGTTTTCCGTTCTATCAGATATCAGCTACAGAAGTGGTTTCCGGAGTTTCAGGAGCGTCTGAAGAAAACATTAGGGAGCTTTTTTCTAAAGCATACAGGACTGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAACTGCTGACTTCAATGGATCAATCGAGCAGGCTCTTACAACCAGCTGGTAGTTCAGAAAGTTCTGATGCTCATCCTGGCTATATTCTTGTTATCGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCCGGGCGATTTGACCGTGAAATTTTTCTTGGTGTCCCTGATGAATATGCTAGGGAGGAGATCTTGTCTGTGCTTACTCGCAATCTAACCCTGGAGGGCTCATTTGATCTTAGAAAAATAGCCAGGTCTACACCAGGTTTTGTTGGAGCAGATTTGGCAGCTCTAGCTGACAAGGCTGGTAACCTAGCAATGAAAAGAATTATTCATGAAAGGAAACGTGAATTATCCCAAGATCTTTTAGATGAGCACGATGAAGATTGGTGGAGGGAACCTTGGTTCCCAGAAGAGATGGATAAGCTGGTCATCAGAATGTCAGATTTCGAGCAAGCAGTCAAATTGGTTCAACCTTCATCAAGAAGAGAAGGGTTTTCTTCCATTCCTAATGTAAAATGGGAAGATATTGGTGGGCTTGATCTTCTAAGACAAGAGTTTGAGCGTTATATTGTTAGACGCATAAAATATCCAAATGATTATAAGGAATTTGGGGTGGACCTTGAGGCGGGATTTTTGCTCTATGGACCACCAGGATGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTTATTCATATCCAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGCGAGCTAGCAGTACGGACATTGTTTAGTCGTGCAAGAACATGTTCACCTTGCATTCTTTTTTTTGACGAGGTGGATGCACTGACAACCAAACGTGGTAAAGAAGGTGGATGGATTGTTGAGCGACTGTTGAACCAGTTACTTGTTGAGTTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGGGCCACTAACAGACCTGAGGTGATGGACCCTGCGGTCCTTCGGCCTGGTAGGTTAGGTAAACTTCTATATGTTCCTCTGCCAAGCTCAGATGAACGAGGCTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCAATTGATGACAGCGTGGATTTGTGTGCCCTTGGAAGAATGGAAGCTTGTGAAAATCTCAGCGGTGCTGATCTCGCTGCATTGATGAATGAAGCAGCGCTAGCTGCTGCTGAAGAGAAGTCGGCATCAACAGATAGAACTTCAGATGCATTGACCATCAAGTTCAGCCATTTTGAGACTGCTCTCACTAAAATCTCTCCATCAGTGTCAGACACGCAAAAACAATACTATCAGCGATTGACAGAGACTTTTAGGGCTGCATGA 2481 0.4381 MGRRTGRRSLHEILRRRLESCKSRYSTIDEIVNHLRANYPDYQRTKQQNLTRFVQEALESSKRGNKQLNRKPNTSMLKPDGSEDSDEDEEEEEGRSASQKRAKKVEEGEERLQKTESLHLQRLQRDRSRRLSTSSASTSSPSSSSESEESDGEDGTVSTSEDAIYEEKVEPAFDLTKTMLRASYSGTKNVKSTAEEKNVALEVTNNNKATKIDAMYGVGGNMKDDLEPKRQLRGSVSNGNGDVEVKGKGGPRFKDLGGMEKVLEELKMEVIVPLYHPQLPRKLGVRPMAGILLHGPPGCGKTTLALAIANETGFPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLLTSMDQSSRLLQPAGSSESSDAHPGYILVIGATNRPDAVDPALRRPGRFDREIFLGVPDEYAREEILSVLTRNLTLEGSFDLRKIARSTPGFVGADLAALADKAGNLAMKRIIHERKRELSQDLLDEHDEDWWREPWFPEEMDKLVIRMSDFEQAVKLVQPSSRREGFSSIPNVKWEDIGGLDLLRQEFERYIVRRIKYPNDYKEFGVDLEAGFLLYGPPGCGKTLIAKAVANEAGANFIHIQGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVDALTTKRGKEGGWIVERLLNQLLVELDGAEQRQGVFVIGATNRPEVMDPAVLRPGRLGKLLYVPLPSSDERGLILKALARKKPIDDSVDLCALGRMEACENLSGADLAALMNEAALAAAEEKSASTDRTSDALTIKFSHFETALTKISPSVSDTQKQYYQRLTETFRAA 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1264 826 CDD RecA-like_NVL_r2-like 560 720 - -
Alju05g1264 826 ProSitePatterns AAA-protein family signature. 405 423 IPR003960 GO:0005524|GO:0016887
Alju05g1264 826 Gene3D - 436 544 - -
Alju05g1264 826 Gene3D - 723 802 - -
Alju05g1264 826 MobiDBLite consensus disorder prediction 130 146 - -
Alju05g1264 826 MobiDBLite consensus disorder prediction 58 79 - -
Alju05g1264 826 SMART AAA_5 588 724 IPR003593 GO:0016887
Alju05g1264 826 SMART AAA_5 287 437 IPR003593 GO:0016887
Alju05g1264 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 542 IPR027417 -
Alju05g1264 826 Gene3D - 550 816 IPR027417 -
Alju05g1264 826 FunFam Ribosome biogenesis ATPase RIX7 242 434 - -
Alju05g1264 826 FunFam Cell division control protein 48 homolog C 436 544 - -
Alju05g1264 826 FunFam ATPase, AAA family protein 550 728 - -
Alju05g1264 826 Gene3D - 245 434 IPR027417 -
Alju05g1264 826 MobiDBLite consensus disorder prediction 58 169 - -
Alju05g1264 826 PANTHER AAA-FAMILY ATPASE 92 824 - -
Alju05g1264 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 822 IPR027417 -
Alju05g1264 826 Pfam AAA+ lid domain 458 493 IPR041569 -
Alju05g1264 826 Pfam AAA+ lid domain 745 782 IPR041569 -
Alju05g1264 826 Pfam ATPase family associated with various cellular activities (AAA) 291 434 IPR003959 GO:0005524|GO:0016887
Alju05g1264 826 Pfam ATPase family associated with various cellular activities (AAA) 593 721 IPR003959 GO:0005524|GO:0016887
Alju05g1264 826 ProSitePatterns AAA-protein family signature. 692 710 IPR003960 GO:0005524|GO:0016887
Alju05g1264 826 MobiDBLite consensus disorder prediction 94 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1264 Alju-ChrAlju05 40517465 40522804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1264 523 824 Calmodulin-binding Proteins AT3G56690 42.434 4.87e-67 239