Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1250 ATGGAGTTTGTAGCGACCATTTTTGGGAAAGTGTTGGATGTCATGGTAGGACCTGTTGCACGACAACTGGATTACCTTTACAACTACAGAAACAATGTTCAGCAGCTGGGAGGTCGTGTCCGGGAGCTCCAAGATCAAAGGGAGAGCGTGAGAGTTCAAGTTCGAGAAGCTGAAAGAAATGGTGAGAACATTCACGATCATGTCACTGAGTGGTTGACGAAGACAGATGAGAAGATTGTAGAATTTGAGGAGTTTCAAAATGATGAAGGCCACCTGAAGACGGGGTGCTCCAATGGTTCGTTTCCTAACTTGAAGTCAAGGCACAGAATTGGCAGAAAAGCGAAGAAGATGATTCCACAGTATGATCATCTGCTGCTGCAACATTCAAACTTTGCTACTTTTTCTTATCGCCCAGTTCCAGAAGCATCAGATGTTGCTGTTTATGATAATGGCTATGAACCATTTAAATCAAGAGATGCCATTTTGGAGGAGGTTATGAATGCGCTGAGAGATCCCACAATTAAAATGATTGGCATCTATGGGCAGGGAGGTGTTGGCAAAACCACTTTAGCTAAAGCAGTTGCAAGGAAAGCTAAAGAAGAAAAGCTCTTCAATGTTGTGGTTATGGCAAATATAACAAGCACTCCTGATGTAAGAAAGATTCAGGGAGAGATGGCGGACATGTTGGGCTTGACATTGGATGATGAGAGCGAGACTGGAAGAGCAGGTCGTTTGCTACAGAGATTGAAGAAAGAGACGGAGAACACCTTAATCATTTTAGATGATCTTTGGGCTGGACTTGACTTGAATATGTTGGGGATTCTATTGAAGGATGATGACGCCAAGCAAATAACAATAGAAAATATGCCTTACATTAGTCAGGACAAGTTTAAAGATGACAAGATGGCAAGTGATTCCAAAAGGTGCAAAATTTTGTTGACTTCTCGACAAAAAGAGGTATTGTCAAGTGAAATGGAAGTAAAGGATGCAATTTTCACCGTGAATGTCATGGAAGAAGAGGAATCAGAGAAGCTGTTCAATAAGGTGGTTGGAATAAACGATGAAGATTTAGAGTTGAAATCATTATCAACTAAAATTGTTCACAAATGTGCAAATTTGCCATTAGCAATAGTAGCAACTGGAAAAGCTTTGAAGAATAATAAGAACAAAGTTGCCTGGGAAAATGCGCTACAACGCTTGGAAAAGCAAGAAATGACTGAAGTATTAAAACCTGTGGAGTTTTCTGCGATGTTAAGTTATGATCGCTTACCAAGTGAAGAGCTCAGGTCTGTTTTCTTGCTTTGTGCTCGTCTGGGAAAGGATCCATCAATTATGTATTTGGTGAGATATTGCATTGGCTTAAGCATATTTCAAGAAGCCAATACAATAAAAGAAGTTAGAGATAGAACAAATGAGTCTATCAAGAAGTTGAAAGACTCTAGCTTGTTGTTGGATACTAAATCTCCTGATTGTGTTACTATGCATGATATGATCCGTGATGCTGCCTTATCAATAGCATACAAGCAGAAAAATGTTTTTACTCGGAGATATGTCAAACTTGATGAATGGCTTGACAAGGTTACAATTGAAAATTGTACTGTCATTTCTTTGCACTACTGCGATATTGTTGATGGGATTCCTGAAGGTATAAATTACCCTGAGCTCAAAGTCCTCCATATTGATAGCAAAGATCCTTCCGTAAAAATACCAGACAAACTTTTTGAAGGAATGAAAGAATTGAGAGTGTTAACATTGACTGGTATTGATTTATCAAACTTCCCTTCTTCCGCAAAAGGCTTAATGAAGCTTAGAATGCTTTGCTTGGAGCAATGTATGCTAGGTGACAACATATCCATTATTGGAGAGTTGAAGAATTTAAGAGTTCTAAGCCTTTTGGGATCTAAATTTGAATTATTGCCAAGTGAACTAAGGCAATTGGGCAGGCTACAATTGTTTGACATGAGTAGCTGTACTAAACTTAAAGTGATTCCATCTAATGTAATATCAAAGTTAAATAGTTTGGAAGAGTTGTATATGGGAAAAACCTTGATCCGATGGGGCATTGAAAGAAAACCAAATCAGTGTGAAATTGCCACTCTTGATGAATTGAGATGTCTTCAACAGTTGAGGAGTCTGGATATATACATACAAGATATTGCAACTTTGCCTAGTAGCTTGTATTTTGACAAGTTGGATAGCTATAAAATTGTGATTGGCGACTCTAAGATATACTTTTTTTGA 2241 0.3846 MEFVATIFGKVLDVMVGPVARQLDYLYNYRNNVQQLGGRVRELQDQRESVRVQVREAERNGENIHDHVTEWLTKTDEKIVEFEEFQNDEGHLKTGCSNGSFPNLKSRHRIGRKAKKMIPQYDHLLLQHSNFATFSYRPVPEASDVAVYDNGYEPFKSRDAILEEVMNALRDPTIKMIGIYGQGGVGKTTLAKAVARKAKEEKLFNVVVMANITSTPDVRKIQGEMADMLGLTLDDESETGRAGRLLQRLKKETENTLIILDDLWAGLDLNMLGILLKDDDAKQITIENMPYISQDKFKDDKMASDSKRCKILLTSRQKEVLSSEMEVKDAIFTVNVMEEEESEKLFNKVVGINDEDLELKSLSTKIVHKCANLPLAIVATGKALKNNKNKVAWENALQRLEKQEMTEVLKPVEFSAMLSYDRLPSEELRSVFLLCARLGKDPSIMYLVRYCIGLSIFQEANTIKEVRDRTNESIKKLKDSSLLLDTKSPDCVTMHDMIRDAALSIAYKQKNVFTRRYVKLDEWLDKVTIENCTVISLHYCDIVDGIPEGINYPELKVLHIDSKDPSVKIPDKLFEGMKELRVLTLTGIDLSNFPSSAKGLMKLRMLCLEQCMLGDNISIIGELKNLRVLSLLGSKFELLPSELRQLGRLQLFDMSSCTKLKVIPSNVISKLNSLEELYMGKTLIRWGIERKPNQCEIATLDELRCLQQLRSLDIYIQDIATLPSSLYFDKLDSYKIVIGDSKIYFF 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1250 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 435 IPR027417 -
Alju05g1250 746 Coils Coil 26 60 - -
Alju05g1250 746 Gene3D - 336 423 IPR042197 -
Alju05g1250 746 PRINTS Disease resistance protein signature 370 384 - -
Alju05g1250 746 PRINTS Disease resistance protein signature 644 660 - -
Alju05g1250 746 PRINTS Disease resistance protein signature 176 191 - -
Alju05g1250 746 PRINTS Disease resistance protein signature 250 264 - -
Alju05g1250 746 Coils Coil 383 403 - -
Alju05g1250 746 SMART AAA_5 173 356 IPR003593 GO:0016887
Alju05g1250 746 Gene3D Ribonuclease Inhibitor 459 743 IPR032675 -
Alju05g1250 746 SUPERFAMILY L domain-like 494 725 - -
Alju05g1250 746 CDD AAA 158 265 - -
Alju05g1250 746 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 22 717 - -
Alju05g1250 746 Gene3D - 147 335 IPR027417 -
Alju05g1250 746 Pfam NB-ARC domain 160 282 IPR002182 GO:0043531
Alju05g1250 746 Pfam NB-ARC domain 304 407 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1250 Alju-ChrAlju05 40053264 40055504 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1250 174 516 WRKY Transcription Factor Family AT5G45050 23.496 1.57e-06 50.1