Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1243 ATGCTTCGCTGTCCCAAGCTTGCGCTCTCCTTCTCCTTGCAACAGAGTAAAATAATCCTTTTTACAGGAGAATCTTCTGACACTGCTCTTCCATTAGAGAAGAGAGAGAACGGAGAAGCTTCATTTTTGAATTTGGCTTCCATTGTTTTATATCGTTCTTCTTTCGTCTTGTGGCCAAGCTTCCGACAAGCTGGGTTTTCCAGACTTGATCACCTTCATCCATTTATGTCGCAATTTGTGTGTTATACAGAGATTCTGGAGCTTGAAGACGAAGCTAAATTGAGTTGGTTTCTTAATCTTAAAGGGGAGAAGAAGATCAAATTGGGATCTGATGTGTTTGAAGAGGGTGAATCTTTTGAGTATTGCTTGAATCAATTTGACTTGAAGACTCGTGGGACATGGTTAGATATCAAAAAAATGGTGGAGCAACGTGGGGAAGTCGATGATAACTATTCCATAGAAGACTGGTTCTTGCGAGCTCAAGAACTCGTACCTGTTGCAATTAACAAGGCAAAAGAAGAGGTAAAGGGCTTTTCTGGTAGGTGGAAAGTGATTGTTTCAAAGATAGAACAGATCCCAACATGCTTATCAGACTTGTCTAGCCATCCTTGCTTCTCCAAGAATGCTCTTTGTAAGGAGCAATTGCAGGCTGTGTCGAAGACACTCGAGGAAACCATCCATTTGGCTGAGTTATGCGCGAAGGAGAGGTACGAAGGTAAGCTTCGAATGCAAAGTGATCTCGATGCTTTATCCGGGAAGTTGGATTTGAATTTACAAGATTTTCGGCTTTTGATCAAGACCGGTGTCCTTGGCGAGTCTACTTTCCCATTGGGAATGTCTGATGATGTGAAACAAGGGAATGATGTGAGAGAATTGTTTGCTCGCCTTCAGATTGGTGACTTGGAGGCCAAGCACAGAGCTATAGATAGTCTTACTGAAGCAATGAAGGAAGAAGAAAAGAGTGTTATGGCTGTTGTAGGAAGAAGTCAAATTGCTTCTTTAGTTCAATTGTTAACGACTACTTGTACTAGGATAAGGGAAAAAGCGGTTACTGTCATATGTTGTCTTGCAGAATCCGGTAACTGCGAGAATTGGCTTCTCTCTGAGGGAGTTTTGCCGCCTCTGATTCGTCTTATCGAATCTGGCGGTGCTATTGGGAGAGAGAAGGCTGTGATATGTCTTCAGAGGCTGTCTATGTCAGAGGAATCGGCCCGAGAAATTGTCGGACACGGCGGGGTTAGACCGATGATTGAGCTATGTCATAATGGGGATTCCGTGTCCCAATGTATTGCTGCTTGTTCTCTGAAGAACATATCTGTTGTTCCTGAATTGAGACAAGCTTTGGCTCAAGAAGGCATTGTGAAGACCATGATCAATCTCCTTGATCATGGAATCGTACCGGGATCCAAGGAATCTGCTTCAGAGTGTTTACAGAACCTCACATCAAGCAATGAGAATCTAAGAAGGTGTGTCATATCAGAAGGTGGTGCTAAAAGCCTTCTTGCTTATCTTGATTCTCCACTCCCTCAAGAATCAGCTGTCACAGCATTGAGGAATCTAGTTGGATCAATCAGCGAGCGGGATTTGATCTCACTAGGTCTCCTTCCTCGTTTGATGCATGTGCTGAATTCGGGATCTCCCGGAGCTCAGCAGGCCGCCGTGTCGGCAATATGCCGGGTTTTGACCTCGTCGGATATGAAGAAAATGGTGGCCGAGGCCGGATTCATCCCACCACTCATCAAAATGCTGGAGGCTAAACCGAACGGCGTGAGGGAATTGGCGGCGCAAGCCGTTGCGAGCTTGATGACGGTAACACAAAACCGGAGGGAGGTGAGGAGGAATGATAAGAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCAAGCCCACACAATACTGCAAAGAAATATGCAATTTCCTGTTTATGTTCACTTTCTTCAAGCAGGAAATGTAAGAAGCTGATGATTGCTTATGGGGCAATTGGATATCTAAAGAAGCTTAAAGAGATGGACATTCCAGGAGCTAAACTGCTACTTGATAGATTGGAAAGAGGGAAATTGCGAAGCTTATTTAACAGAAAATAA 2082 0.4409 MLRCPKLALSFSLQQSKIILFTGESSDTALPLEKRENGEASFLNLASIVLYRSSFVLWPSFRQAGFSRLDHLHPFMSQFVCYTEILELEDEAKLSWFLNLKGEKKIKLGSDVFEEGESFEYCLNQFDLKTRGTWLDIKKMVEQRGEVDDNYSIEDWFLRAQELVPVAINKAKEEVKGFSGRWKVIVSKIEQIPTCLSDLSSHPCFSKNALCKEQLQAVSKTLEETIHLAELCAKERYEGKLRMQSDLDALSGKLDLNLQDFRLLIKTGVLGESTFPLGMSDDVKQGNDVRELFARLQIGDLEAKHRAIDSLTEAMKEEEKSVMAVVGRSQIASLVQLLTTTCTRIREKAVTVICCLAESGNCENWLLSEGVLPPLIRLIESGGAIGREKAVICLQRLSMSEESAREIVGHGGVRPMIELCHNGDSVSQCIAACSLKNISVVPELRQALAQEGIVKTMINLLDHGIVPGSKESASECLQNLTSSNENLRRCVISEGGAKSLLAYLDSPLPQESAVTALRNLVGSISERDLISLGLLPRLMHVLNSGSPGAQQAAVSAICRVLTSSDMKKMVAEAGFIPPLIKMLEAKPNGVRELAAQAVASLMTVTQNRREVRRNDKSVPNLVQLLDPSPHNTAKKYAISCLCSLSSSRKCKKLMIAYGAIGYLKKLKEMDIPGAKLLLDRLERGKLRSLFNRK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1243 693 Coils Coil 301 321 - -
Alju05g1243 693 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 370 412 IPR000225 GO:0005515
Alju05g1243 693 SUPERFAMILY ARM repeat 330 656 IPR016024 -
Alju05g1243 693 Gene3D - 286 673 IPR011989 -
Alju05g1243 693 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 148 691 - -
Alju05g1243 693 SMART arm_5 563 603 IPR000225 GO:0005515
Alju05g1243 693 SMART arm_5 441 482 IPR000225 GO:0005515
Alju05g1243 693 SMART arm_5 483 522 IPR000225 GO:0005515
Alju05g1243 693 SMART arm_5 400 440 IPR000225 GO:0005515
Alju05g1243 693 SMART arm_5 317 358 IPR000225 GO:0005515
Alju05g1243 693 SMART arm_5 605 646 IPR000225 GO:0005515
Alju05g1243 693 SMART arm_5 523 562 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1243 Alju-ChrAlju05 39937558 39940687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1243 533 677 U-box Gene Family AT2G23140 31.507 3.93e-08 54.7