Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1205 ATGGATGCTCTTCAGAAACACGCTGTCCAATTCCGGGATCCGCAAAGCGTTGATCTCAGGCTTCACAGTGGCGGAGAAGAAGAACCCAAAACGGGGCTGATAAACGGACCCAAACAAGAACCGGCTTCGGAGGAGGGCTCACCGGAGGCGATGCAGGTTATGCCGGTGGCGTTGCACGTGCCGCGAAAGAAGGCTTCGACTAAGGACCGTCACACAAAGGTAGAGGGGCGCGGCCGGAGGATCCGAATGCCTCCCACTTGCGCTGCTCGGATCTTCCAGTTGACCCGGGAATTGGGTCACAAGTCCGACGGTGAAACCATCCGGTGGCTTCTCGAACATGCGGAGCCCGCCATCATCGCCGCCACTGGCACCGGCACTGTGCCCGCCATAGCCATGTCCGTTAACGGAACCCTCAAAATCCCAACTACCCCGTCCACCAGTAACAAGCCCAAACCCGATGACCCACCCGAAAGGAAGAAACAAAAGCGATCGACGAACAATTCGTACGCAGAGCTGAACGACGGCGTCTCAGGTTCCGTCGGCCTTGCTCCGATATCAACAACGGCGACAACGACAACAACAAAACCAAGTACAACAACAGTTAATAACCAACAAGCAACGATACCATTAGCACAAGGATTAGTCCCCATGTGGGCGATCCCGTCAAACGTCGTCGTTCCGGCGGGTACGTGCTTCTTAGTCCCACCGATGGGTTCCATCACCGGAAATTCGACAAGCCAGCCACAGCTTTTCGCAATCCCCGTGAATGCGACGCCTCTGGTAAACATTCCAGCGAGACCTATATCGGCTTTCGTCTCATTAATGGAGAACATCGTAGCGCCTGTTCAGTTACAAGCAGCGACAACAATACCTCGGTGTTCAACTTCCCCGACCGTGAAACCACCGAAAGAAGCGACGATTCCGGCACCGAGCTCAACCTCTGGTGCTACCACCCCAAGCACAACCCAGACGCTGAGAAAATTCTCACTAGAGATTTACGATAAGGAGGAGCTTCAACTCAATTCCGGCTATTCAAAGCAGTGA 1044 0.545 MDALQKHAVQFRDPQSVDLRLHSGGEEEPKTGLINGPKQEPASEEGSPEAMQVMPVALHVPRKKASTKDRHTKVEGRGRRIRMPPTCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTPSTSNKPKPDDPPERKKQKRSTNNSYAELNDGVSGSVGLAPISTTATTTTTKPSTTTVNNQQATIPLAQGLVPMWAIPSNVVVPAGTCFLVPPMGSITGNSTSQPQLFAIPVNATPLVNIPARPISAFVSLMENIVAPVQLQAATTIPRCSTSPTVKPPKEATIPAPSSTSGATTPSTTQTLRKFSLEIYDKEELQLNSGYSKQ 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1205 347 MobiDBLite consensus disorder prediction 293 322 - -
Alju05g1205 347 MobiDBLite consensus disorder prediction 1 49 - -
Alju05g1205 347 Pfam TCP family transcription factor 66 159 IPR017887 -
Alju05g1205 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 52 275 IPR005333 GO:0003700
Alju05g1205 347 MobiDBLite consensus disorder prediction 166 183 - -
Alju05g1205 347 MobiDBLite consensus disorder prediction 151 165 - -
Alju05g1205 347 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Alju05g1205 347 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1205 Alju-ChrAlju05 38571487 38572530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1205 61 339 TCP Transcription Factor Family AT2G45680 51.839 3.41e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju05g1205 TCP 3.5e-29 No_clan