Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1202 ATGGGAGTAGGAATCTGCGATGGAGAAGGAATTGATCCGATCCGATTGTATGAAACGGTGAAGAAGGCGGCGGACGTGGCAGCAGCAACCTCGTCCGACTGTGAATTCGAAGAAAACCGATGCCTGGACGCTCTCAGGCTGCTGAAGAAGTTTCCTGTCAACTATAAAATTCTGGTAGCAACCCATTTGGGTAAACATCTAAGAGTTCTAACAAAGCATCCCAGGAAGAAGATCCGAGCTTTCTCTATGGACCTGGTAGAGATATGGAGAGCCACAATATTGAAGGAAGCAAGCAAAATTAAGAAAGAAACAGGATCCAAAGAACCCAGATTTCCGAAGGAGGGTTCTGCTCGGAGAAATCTCACCGGAGCTGCTGGTGAAGATGAAAACACAAGAGATGGCGAGTGA 408 0.4706 MGVGICDGEGIDPIRLYETVKKAADVAAATSSDCEFEENRCLDALRLLKKFPVNYKILVATHLGKHLRVLTKHPRKKIRAFSMDLVEIWRATILKEASKIKKETGSKEPRFPKEGSARRNLTGAAGEDENTRDGE 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1202 135 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 14 108 IPR035441 -
Alju05g1202 135 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 37 106 IPR035441 -
Alju05g1202 135 PANTHER TRANSCRIPTION FACTOR IIS FAMILY PROTEIN-RELATED 14 108 - -
Alju05g1202 135 Pfam TFIIS helical bundle-like domain 44 92 IPR017923 -
Alju05g1202 135 CDD TFIIS_I 37 93 - -
Alju05g1202 135 ProSiteProfiles TFIIS N-terminal domain profile. 18 96 IPR017923 -
Alju05g1202 135 SMART TFS2_5 16 95 IPR003617 GO:0005634
Alju05g1202 135 MobiDBLite consensus disorder prediction 100 115 - -
Alju05g1202 135 MobiDBLite consensus disorder prediction 100 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1202 Alju-ChrAlju05 38523467 38524847 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Alju05g1202 Med26 1.1e-05 No_clan