Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1199 ATGGATAATTACGGGTCTTCATCACCACACCGTTATCCAAGCTCGTATGGATATCATAGTAATCCTCCTCCACCTTATCCACCTCCAGCTTCAGATCCAATGGCACCTCCTCCTTACCCTTATGCATTCAATCATTCACATTCCTTCAACTATTCCTACCCCCCACCTCCGCCACCATTTGATAATAGCCATTACCCTCCACCACCAGACTATAGCCACCCCCCTCTGCCGCCGGATTATAGCCATACTACTCCACCATCTGACTTCAATTATCCCCCTCCGCCGCCATATTCTGCTCCTCAGCCTTATCCTCATCCATGCCCCATTCCTCCAGGGGTTTATAACACCCCTAATAGTTTTCAGTATGGATCATCTCATTATCCGCCCCAACAAACCGAGGCAGGTCCATATCCCCAAAGTCAACCTCTTTCCCATTCACGTGCAAATAGTTTTTCTGGTTCCCCCCAGCATGAGAGAATGAGCTCTGCTGGGGGTCTATCATTGCAAACTAGTCATAGTTTCAGTCCTTCTCGGACTTCTGCGTACCCACCTTTGGATGATCTTATGGACAAAGTTAGCTTGTCTGATAACCAGCCAGCCGCTCCTGCATCGCCTCCTGCACCGGTAGGGCAGCAAATGGCACATTCCATTTCAGTTCCACACCAAGATAGGAGAGAGGAATTTTACGCTTATCCTAATAACTCCTCTGGATCAGGATCTTCCTACTCTGGTCGGATTGATTCATCTAAACTTTCATCTTATTCGGGCTCATTTAATGATTTGGTTTATAATCAGAGTTTGCAGATTGTTCCATCACCGAATAAAGGATCATTGAAAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCGTGGAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTAGGGGATATGTTTGGTAAATTACCAGGAAACATGGGCAACAAAATTGAGGGAACTATGAGTACGAAGATTACTAGTGATCCTTATGTTACAATTTCAGTATCCAATGCTGTAATTGCAAGGACTTTTGTGATTAGCAACAGTGAGAATCCTGTTTGGACTCAACATTTTCATGTTCCCGTTGCACATACTGCTGCTGAAGTGCACTTTGTTGTTAAAGACAATGATGTAGTAGGTTCACAGGTCATTGGCATTGTATCAATTCCTGTGGAACAAATATACTCACGGGAAAGAATAGAAGGGACCTATCCTGTGCTGAATAATAATGGGAAGCCCTGTAAGCCAGGTGCCGTCTTGAGCTTATCCATTCAGTACATCCCAATGGAGAGACTGAGCATTTATCACCAAGGAGTTGGAGCTGGGCCAGAATACACTGGAGTTCCTGGCACTTATTTTCCTTTGAGGAAAGGTGGAACTGTTACTCTATATCAAGATGCCCATGTTCCGGATGGCTGCCTCCCTAATGTGATACTTGACCAAGGGATGTATTATGCACATGGAAAATGTTGGCATGACATCTTTGACGCCATTCGTCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTTTGGCACAAAGTTCAGTTGGTAAGGGATGTTGGTAATCCATCAGGTTACACACTGGGTGACCTTCTAAGGTCCAAGTCACAGGAAGGAGTCAGAGTGCTTCTTCTTGTTTGGGACGATCCGACATCAAGGAGCATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAACACTCTTCTGTTCAAGTGCTGCTTTGTCCACGCGTTGCGGGAAAACGACATAGCTGGATCAAGCAAAGGGAAACTAGTACTATATATACGCATCACCAGAAAACTGTAATTGTTGATGCTGATGCTGGAAGTAATAGAAGAAAAATTGTAGCATTTGTTGGCGGACTTGATTTGTGTGACGGGCGATATGATACTCCCCATCATCCTCTTTTTAGGACACTCCAGACACTGCACAAGGATGACTATCACAACCCTACTTTCACAGGTAACGTTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGTCCAGCAGCATATGATGTTCTGACCAACTTTGAGGAGCGCTGGTTAGAAGCTTCAAAACCTCGTGGGATAAAAAAGTTGAGAAGTTCATATGATGATGCTTTGCTTAGGCTGGAAAGAATCTCAGACATTATTGGCATGTCTGATGCTCTTAGTGCTAATGATAATGACCCTGAAGGTTGGCATGTTCAGATATTTCGATCAATTGATTCAAATTCTGTAAAGGGGTTTCCAAAGGATCCAAAAGATGCGACAAGCAAGAATTTAGTTTGTGGGAAGAATGTATTGATCGACATGAGCATACATACAGCATACGTGAAGGCCATCCGTGCTGCACAGCACTACATATATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATTGCCCTCAAGATTGCTGAAAAGATCAGGGCCAATGAGCGATTTGCTGTGTATATTGTTATTCCAATGTGGCCTGAGGGTGTTCCCACTGGGGCGGCCACGCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTGGAAGAGGCATTCTCACCAGAAGACTACTTGAACTTTTTCTGTCTTGGCAATCGGGAGGTCAATGATACATATGGTAATAATGCAATGCCTGGAAATCCTCCTCCAGAAAATAGTCCACAGGCACTAAGTCTAAGTAGCCGACGTTTCATGATTTACGTTCATTCAAAAGGCATGATAGTTGATGATGAGTATGTTATATTGGGATCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGGGCTTACCAACCTCATTATACCTGGGCAACAAGACATTCTTATCCACGTGGACAGATCCATGGATATAGGATGTCACTCTGGGCAGAACACACAGCAACAATTGAAAACTGCTTCTTGCAACCGGAGAGCCTTGAATGCGTAAGAAGAATAAGAGCGATGGGTGAAATGAACTGGAAACGATTCGCGGCACCCGAAGTAACGGAGATGAAAGGGCACCTACTTAAATACCCAGTAGAAGTTGATCGAAAGGGGAAGGTTAGATCCCTCCCTGGCCATGAAAATTTCCCTGATGTTGGAGGCAAAATAACAGGGTCATTCCTTGCCATTCAGGAGAATCTTACCATTTAA 3300 0.4364 MDNYGSSSPHRYPSSYGYHSNPPPPYPPPASDPMAPPPYPYAFNHSHSFNYSYPPPPPPFDNSHYPPPPDYSHPPLPPDYSHTTPPSDFNYPPPPPYSAPQPYPHPCPIPPGVYNTPNSFQYGSSHYPPQQTEAGPYPQSQPLSHSRANSFSGSPQHERMSSAGGLSLQTSHSFSPSRTSAYPPLDDLMDKVSLSDNQPAAPASPPAPVGQQMAHSISVPHQDRREEFYAYPNNSSGSGSSYSGRIDSSKLSSYSGSFNDLVYNQSLQIVPSPNKGSLKVLLLHGNLDIWVRGAKNLPNMDMFHKTLGDMFGKLPGNMGNKIEGTMSTKITSDPYVTISVSNAVIARTFVISNSENPVWTQHFHVPVAHTAAEVHFVVKDNDVVGSQVIGIVSIPVEQIYSRERIEGTYPVLNNNGKPCKPGAVLSLSIQYIPMERLSIYHQGVGAGPEYTGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVILDQGMYYAHGKCWHDIFDAIRQARRLIYITGWSVWHKVQLVRDVGNPSGYTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRVAGKRHSWIKQRETSTIYTHHQKTVIVDADAGSNRRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTLHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLEASKPRGIKKLRSSYDDALLRLERISDIIGMSDALSANDNDPEGWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEAGLEEAFSPEDYLNFFCLGNREVNDTYGNNAMPGNPPPENSPQALSLSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWATRHSYPRGQIHGYRMSLWAEHTATIENCFLQPESLECVRRIRAMGEMNWKRFAAPEVTEMKGHLLKYPVEVDRKGKVRSLPGHENFPDVGGKITGSFLAIQENLTI 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1199 1099 SMART pld_4 610 645 IPR001736 GO:0003824
Alju05g1199 1099 SMART pld_4 945 972 IPR001736 GO:0003824
Alju05g1199 1099 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 945 972 IPR001736 GO:0003824
Alju05g1199 1099 MobiDBLite consensus disorder prediction 1 15 - -
Alju05g1199 1099 FunFam Phospholipase D 758 991 - -
Alju05g1199 1099 SMART C2_3c 286 408 IPR000008 -
Alju05g1199 1099 MobiDBLite consensus disorder prediction 52 218 - -
Alju05g1199 1099 PANTHER PHOSPHOLIPASE D 275 1090 IPR015679 -
Alju05g1199 1099 FunFam Phospholipase D delta 486 724 - -
Alju05g1199 1099 CDD C2_plant_PLD 279 432 - -
Alju05g1199 1099 Gene3D Endonuclease Chain A 486 725 - -
Alju05g1199 1099 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 278 434 IPR035892 -
Alju05g1199 1099 MobiDBLite consensus disorder prediction 114 180 - -
Alju05g1199 1099 FunFam Phospholipase D delta 280 427 - -
Alju05g1199 1099 Pfam Phospholipase D Active site motif 611 645 IPR001736 GO:0003824
Alju05g1199 1099 Pfam Phospholipase D Active site motif 946 972 IPR001736 GO:0003824
Alju05g1199 1099 SUPERFAMILY Phospholipase D/nuclease 776 1031 - -
Alju05g1199 1099 MobiDBLite consensus disorder prediction 1 31 - -
Alju05g1199 1099 MobiDBLite consensus disorder prediction 52 113 - -
Alju05g1199 1099 ProSiteProfiles C2 domain profile. 263 409 IPR000008 -
Alju05g1199 1099 SUPERFAMILY Phospholipase D/nuclease 457 710 - -
Alju05g1199 1099 Gene3D Endonuclease Chain A 739 1001 - -
Alju05g1199 1099 Pfam C2 domain 285 411 IPR000008 -
Alju05g1199 1099 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 610 645 IPR001736 GO:0003824
Alju05g1199 1099 Gene3D C2 domain 280 419 IPR035892 -
Alju05g1199 1099 Pfam Phospholipase D C terminal 1019 1089 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1199 Alju-ChrAlju05 38497911 38509343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1199 77 1099 Phospholipase D Gene Family (Wang group) AT2G42010 69.877 0.0 1471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1199 05 38497911 38509343 Alju05g1199 05 38497911 38509343 ECH